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cn_combo_scaffold_5603

Alias: XAN48_90

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5603_1
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..361
DNA (360bp) protein (120aa)
YneN n=1 Tax=uncultured bacterium pTW2 RepID=B8PZV2_9BACT
Thioredoxin {ECO:0000313|EMBL:KGO97715.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-
redoxin protein
cn_combo_scaffold_5603_2

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365..631
DNA (267bp) protein (89aa)
acylphosphatase (EC:3.6.1.7)
AcyP n=1 Tax=uncultured bacterium pTW3 RepID=B8PZW7_9BACT
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=504467 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW3.;"
cn_combo_scaffold_5603_3

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comp(638..1414)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pTW2 RepID=B8PZV0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ACA34408.1}; TaxID=504464 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW2.;"
hypothetical protein
cn_combo_scaffold_5603_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1411..1743)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0002FD39BA
Uncharacterized protein {ECO:0000313|EMBL:EYR66717.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
cn_combo_scaffold_5603_5

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comp(1825..2271)
DNA (447bp) protein (149aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured bacterium pTW2 RepID=B8PZU8_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACA34406.1}; TaxID=504464 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW2.;"
acetyltransferase
cn_combo_scaffold_5603_6
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2338..3426)
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=1 Tax=uncultured bacterium pTW2 RepID=B8PZU7_9BACT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
prfA; peptide chain release factor 1
cn_combo_scaffold_5603_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3423..4688)
DNA (1266bp) protein (422aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZBP5_XANCT
glutamyl-tRNA reductase
cn_combo_scaffold_5603_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4781..6469
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pTW2 RepID=B8PZU5_9BACT
Membrane protein {ECO:0000313|EMBL:KGM53890.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis G
hypothetical protein
cn_combo_scaffold_5603_9
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6466..7089
DNA (624bp) protein (208aa)
LolB n=1 Tax=uncultured bacterium pTW2 RepID=B8PZU4_9BACT
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
outer membrane lipoprotein LolB
cn_combo_scaffold_5603_10
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7086..7958
DNA (873bp) protein (291aa)
ispE; 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UBH7_XANAP
cn_combo_scaffold_5603_trna_1
unknown

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7957..8029
DNA (73bp)
transferRNA
cn_combo_scaffold_5603_11
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8079..9038
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003609722
cn_combo_scaffold_5603_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9149..9802
DNA (654bp) protein (218aa)
50S ribosomal protein L25 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6FD4D
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1444315 s
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
cn_combo_scaffold_5603_13
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9865..10446
DNA (582bp) protein (194aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=uncultured bacterium pTW2 RepID=B8PZU0_9BACT
cn_combo_scaffold_5603_14
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10522..11571
DNA (1050bp) protein (350aa)
Ribosome-binding ATPase YchF n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UBI1_XANAP
GTP-binding protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomon
cn_combo_scaffold_5603_trna_2
unknown

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11728..11810
DNA (83bp)
transferRNA
cn_combo_scaffold_5603_trna_3
unknown

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11901..11971
DNA (71bp)
transferRNA
cn_combo_scaffold_5603_15
unknown

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comp(11984..12103)
DNA (120bp) protein (40aa)

This feature has no annotations

cn_combo_scaffold_5603_trna_4
unknown

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12011..12083
DNA (73bp)
transferRNA
Displaying 19 items

View Taxonomy