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cn_combo_scaffold_11905

Alias: XAN48_279

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_11905_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..426)
DNA (426bp) protein (142aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
fructose-1,6-bisphosphatase class 1 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 id=2863143 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cn_combo_scaffold_11905_2
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(521..694)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=V7ZEC4_9XANT
UPF0391 membrane protein N791_10905 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Ly
Protein of unknown function (DUF1328)
cn_combo_scaffold_11905_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(763..1659)
DNA (897bp) protein (299aa)
phhA; Phenylalanine-4-hydroxylase (EC:1.14.16.1); K00500 phenylalanine-4-hydroxylase [EC:1.14.16.1] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
phhA; phenylalanine 4-monooxygenase (EC:1.14.16.1)
phenylalanine 4-monooxygenase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B514
cn_combo_scaffold_11905_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1763..2245
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI00034A4873
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGM56778.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
AsnC family transcriptional regulator
cn_combo_scaffold_11905_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2252..3754)
DNA (1503bp) protein (501aa)
Uncharacterized NAD(FAD)-dependent dehydrogenases n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82SL4_NITEU
Ferredoxin reductase {ECO:0000313|EMBL:KGQ18341.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensi
NAD(FAD)-dependent dehydrogenase
cn_combo_scaffold_11905_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3883..4506
DNA (624bp) protein (208aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG1_9GAMM
GTP cyclohydrolase I
cn_combo_scaffold_11905_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4520..5230
DNA (711bp) protein (237aa)
RNA polymerase sigma factor n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC3_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter d
RNA polymerase sigma factor, sigma-70 family
cn_combo_scaffold_11905_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5360..5611
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GCS7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGQ18278.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
hypothetical protein
cn_combo_scaffold_11905_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5608..6036
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6X8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95219.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
cn_combo_scaffold_11905_10
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6049..6945)
DNA (897bp) protein (299aa)
Patatin n=1 Tax=Xanthomonas arboricola RepID=UPI0002E3DA35
Patatin {ECO:0000313|EMBL:KER81266.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celeben
lipoprotein
cn_combo_scaffold_11905_11
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7202..7846
DNA (645bp) protein (215aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6EB5B
Uncharacterized protein {ECO:0000313|EMBL:KFN42737.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
hypothetical protein
cn_combo_scaffold_11905_12
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7869..8438)
DNA (570bp) protein (190aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC049F
NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96206.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
rhomboid family protein
cn_combo_scaffold_11905_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8712..9665)
DNA (954bp) protein (318aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC193B
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ADV28485.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseud
cn_combo_scaffold_11905_14
unknown

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9702..9884
DNA (183bp) protein (61aa)

This feature has no annotations

cn_combo_scaffold_11905_15
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9893..10291
DNA (399bp) protein (133aa)
oxidoreductase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003732904
Oxidoreductase {ECO:0000313|EMBL:EYR69754.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
oxidoreductase
Displaying 15 items

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