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cn_combo_scaffold_252

Alias: RUB134_10

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_252_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8..328)
DNA (321bp) protein (107aa)
Plasmid stabilization system n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1D7_THIK1
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ADG30933.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (
cn_combo_scaffold_252_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(315..584)
DNA (270bp) protein (90aa)
Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1D6_THIK1
CopG/Arc/MetJ family transcriptional regulator
Putative transcriptional regulator, CopG/Arc/MetJ family {ECO:0000313|EMBL:ADG30932.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomon
cn_combo_scaffold_252_3
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1516..2121
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000372A930
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
cn_combo_scaffold_252_4
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2118..2972
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003649930
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81311.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
cn_combo_scaffold_252_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3059..3493
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGX5_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34603.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
cn_combo_scaffold_252_6
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3665..5230
DNA (1566bp) protein (522aa)
Recombinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF2_9BURK
recombinase Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
serine recombinase
cn_combo_scaffold_252_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5227..6126
DNA (900bp) protein (300aa)
Parb-like partition protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF1_9BURK
Parb-like partition protein {ECO:0000313|EMBL:EIK88991.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga
plasmid stablization protein ParB
cn_combo_scaffold_252_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6123..7007
DNA (885bp) protein (295aa)
Repb plasmid partition n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF0_9BURK
Repb plasmid partition {ECO:0000313|EMBL:EIK88990.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
plasmid stablization protein ParB
cn_combo_scaffold_252_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7011..8381
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0E829_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ENZ78294.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
hypothetical protein
cn_combo_scaffold_252_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8584..8799
DNA (216bp) protein (72aa)
AlpA family transcriptional regulator n=1 Tax=Comamonas testosteroni RepID=UPI0002DE7B2A
AlpA family transcriptional regulator {ECO:0000313|EMBL:KGH10699.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas te
phage transcriptional regulator AlpA
cn_combo_scaffold_252_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8796..9311
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSB9_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62802.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
cn_combo_scaffold_252_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9308..13048
DNA (3741bp) protein (1247aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VBV0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88502.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein rbh
cn_combo_scaffold_252_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13053..14900
DNA (1848bp) protein (616aa)
Putative transcriptional regulator n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSB7_PARL1
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABS62800.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum l
cn_combo_scaffold_252_14
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14897..15646
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum IPO1609 RepID=B5SI45_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYS86157.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
cn_combo_scaffold_252_15
unknown

Not on your lists

15654..15773
DNA (120bp) protein (40aa)

This feature has no annotations

cn_combo_scaffold_252_16
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15715..18504
DNA (2790bp) protein (930aa)
Uncharacterized protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WCE8_9GAMM
DNA methylase {ECO:0000313|EMBL:AJP47973.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
DNA methylase
cn_combo_scaffold_252_17
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18508..21339
DNA (2832bp) protein (944aa)
Helicase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSB4_PARL1
Helicase domain protein {ECO:0000313|EMBL:ABS62797.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
helicase domain-containing protein rbh
cn_combo_scaffold_252_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21336..23384
DNA (2049bp) protein (683aa)
PglZ domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSB3_PARL1
alkaline phosphatase domain-containing protein rbh
PglZ domain protein {ECO:0000313|EMBL:ABS62796.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans
cn_combo_scaffold_252_19
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23409..24125
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSB2_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62795.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
cn_combo_scaffold_252_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24125..25186
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML29_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89919.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
cn_combo_scaffold_252_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25223..27058
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML81_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89971.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
cn_combo_scaffold_252_22
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27059..27574)
DNA (516bp) protein (172aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4G842_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:EWS52939.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
cn_combo_scaffold_252_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27571..28071)
DNA (501bp) protein (167aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
Lysozyme n=3 Tax=Burkholderiales RepID=F4G841_ALIDK
glycoside hydrolase family protein rbh
cn_combo_scaffold_252_24
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28068..28295)
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4G840_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY68813.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurredu
cn_combo_scaffold_252_25
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28292..28594)
DNA (303bp) protein (101aa)
membrane protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035C5238
Uncharacterized protein {ECO:0000313|EMBL:EWS58977.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
cn_combo_scaffold_252_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28704..28925)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=F4G838_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84415.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
cn_combo_scaffold_252_27
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28918..30786)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603X0_METCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU91170.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus ca
cn_combo_scaffold_252_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30790..31179)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DE409
Uncharacterized protein {ECO:0000313|EMBL:GAD22610.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
cn_combo_scaffold_252_29
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31176..32156)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F1F83
Uncharacterized protein {ECO:0000313|EMBL:KGH07166.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
cn_combo_scaffold_252_30
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32160..33431)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGZ7_ACIET
hypothetical protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein
Displaying items 1-30 of 112 in total

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