ggKbase home page

GWC2_PER_33_13_4_44

Organism: x-GWC2_PER_33_13

near complete RP 51 / 55 MC: 10 BSCG 49 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 41729..42313

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XGQ9_CALS8 similarity UNIREF
DB: UNIREF90
  • Identity: 33.0
  • Coverage: 0.0
  • Bit_score: 110
  • Evalue 6.00e+00
ECF family RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 384
  • Evalue 6.50e-104
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 173.0
  • Bit_score: 110
  • Evalue 4.80e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Peregrinibacteria_33_7_curated → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAATGAGACTTTTAAAGATAAGTTGACACTTGAGAAAAAAATCGATTATTTAGTGGAAAAGTGTCAGGAGGAAGATCAACAAGCTTTTTCACAATTATATGATTTATTGATTGATAAGGTTTATCGATATGTTTATTTTAAAGCAGTTCCCTCAGAGGTTGATGATTTAGTCGCTATTTCATTTGTAAAAATTTGGACAAATATTAAAAAATATAAAAAACAAAAAGTGTCTTTCAGTGCTTGGGTTTTTAAAGTAGTTCGTAATGTGATCATTGATCATCATCGTTTTCATAGAAGCGTGGATGTTTTAGAGGATAATATTAAAGATGAAAGAAGCGAGGCAAATCCAAGGCATTTTACTGATCTTCAGATGAATTCTCATGTTTTGAAAAGGGCTTTATCTGAATTGAAAGAAAATTATCAACAAATTTTGGTTATGAAATATTTGAATGACATGTCGAATGATGAAATAGCTTATGCTTTAAATAAGAGCAGATCTACTGTCAGGGTTCTTCAATTCAGGGCTCTTTCCGCCTTAAGGAAAATTTTGAGAAAAAAGCAAATTAGATTTTCGGATTTTTAG
PROTEIN sequence
Length: 195
MNETFKDKLTLEKKIDYLVEKCQEEDQQAFSQLYDLLIDKVYRYVYFKAVPSEVDDLVAISFVKIWTNIKKYKKQKVSFSAWVFKVVRNVIIDHHRFHRSVDVLEDNIKDERSEANPRHFTDLQMNSHVLKRALSELKENYQQILVMKYLNDMSNDEIAYALNKSRSTVRVLQFRALSALRKILRKKQIRFSDF*