ggKbase home page

gwe1_scaffold_624_44

Organism: WS6_GWE1_33_547

near complete RP 48 / 55 MC: 8 BSCG 44 / 51 ASCG 7 / 38 MC: 1
Location: comp(39783..40871)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NLJ5_9FIRM similarity UNIREF
DB: UNIREF90
  • Identity: 57.0
  • Coverage: 0.0
  • Bit_score: 394
  • Evalue 3.00e+00
  • rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:KKP82655.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 362.0
  • Bit_score: 696
  • Evalue 2.50e-197
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 359.0
  • Bit_score: 391
  • Evalue 2.00e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD1_WS6_35_594 → WS6 → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAGTAATCCGTCTTCAAAATCAAAATATATAAAGGAGTTAGTTAAAAAAGGGAAAGAACAAGGGTTTCTTTCCCAAGAAGACATCCTTGAGATATTTCCAACCATTGAGGAAGATATTTCCCTTTTAGATCAGATATTTAAGGAACTACAAGAGAACGATATAGAAGTACTAGAGCCAGAAGAAGATTTAGTAAAAAGTTCTGAAGAACTTACATTAGAAAAAAAGATTAGAATACTTAAAACTATTCAATCAAGTATTTCTACTGATGCAATAAGGTCATATCTTTATGAAATTGGAAAGATTCCTCTCCTTACCGCAGAAGAAGAGGTAATACTTGCAAAAAGAATTGAAGATGGGGATAAGGAAGCGGGACAACTTTTAATTACAGCTAATCTTAGATTAGTTGTAAGCATCGCAAAAAAATACAGTAAAAGTGGCTTAGAATTACTAGACTTAATACAAGAAGGAAACATCGGATTAATGAGAGCTGTGGAGAAATTTGATTACCACAAAGGCTTTAAATTCTCTACATATGCTACTTGGTGGATAAGGCAAGCTATTACGAGGGCAATTGCTGATCAGGCAAGAACTATTCGTGTGCCAGTACATATGATTGAAACCATTAACAAATTCAATAAGGTAAATAGTACATTAACCACAAGACTTGGAAGACAACCAACTGATGAAGAAATTGCAAAAGAAATGGATATTGAATTAGAGAAAATAGCAGAAATAAGAAAGATAAAACAAAATCCATCCTCTCTTGCAACACCAATAGGAGATGAGAAAGATAGTAAATTACAAGATATTCTTCCTGATGAATGGTCTCAAAGCCCGGAAGATTATGCTACGGCTGAATACTTAAAGAATCAACTAAAAGACATCCTTGACTCTCTACAAGATAGAGAAAGAAGAGTTCTTTCTTTAAGATTTGGCTTAACAGATGGAGTAACAAGAACTTTAGAAGAGGTTGGTAGAGAATTTGGAGTAACAAGAGAAAGAATTAGACAGATAGAAGCAAAAGCATTAAAGAAGCTAAAGGACAAATCTTCTGAAAAGAAATTGGATGACTACATTAATACCTAA
PROTEIN sequence
Length: 363
MSNPSSKSKYIKELVKKGKEQGFLSQEDILEIFPTIEEDISLLDQIFKELQENDIEVLEPEEDLVKSSEELTLEKKIRILKTIQSSISTDAIRSYLYEIGKIPLLTAEEEVILAKRIEDGDKEAGQLLITANLRLVVSIAKKYSKSGLELLDLIQEGNIGLMRAVEKFDYHKGFKFSTYATWWIRQAITRAIADQARTIRVPVHMIETINKFNKVNSTLTTRLGRQPTDEEIAKEMDIELEKIAEIRKIKQNPSSLATPIGDEKDSKLQDILPDEWSQSPEDYATAEYLKNQLKDILDSLQDRERRVLSLRFGLTDGVTRTLEEVGREFGVTRERIRQIEAKALKKLKDKSSEKKLDDYINT*