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rifoxyb1_full_scaffold_3125

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_3125_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

rifoxyb1_full_scaffold_3125_2
CG_Woesearch_02, Woesearchaeota, Archaea

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195..701
DNA (507bp) protein (169aa)
id=5044628 Tax=CG_Woesearch_02
id=5044628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifoxyb1_full_scaffold_3125_3
unknown

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851..1243
DNA (393bp) protein (131aa)

This feature has no annotations

rifoxyb1_full_scaffold_3125_4

Not on your lists

comp(1223..2014)
DNA (792bp) protein (264aa)
hypothetical protein id=5044144 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54706.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_3125_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2052..2582)
DNA (531bp) protein (177aa)
putative transcriptional regulator with C-terminal CBS domains Tax=CG_Woesearch_02
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative transcription regulator, containing CBS protein
putative transcription regulator, containing CBS protein
rifoxyb1_full_scaffold_3125_6
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2617..3927)
DNA (1311bp) protein (437aa)
hypothetical protein Tax=RBG_13_Bacteroidetes_42_15_curated
rifoxyb1_full_scaffold_3125_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4031..4897
DNA (867bp) protein (289aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteria
Methylenetetrahydrofolate reductase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LF9_SYMTH
5,10-methylenetetrahydrofolate reductase
5,10-methylenetetrahydrofolate reductase
rifoxyb1_full_scaffold_3125_8
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4894..6051
DNA (1158bp) protein (386aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase (EC:2.5.1.6)
Methionine adenosyltransferase {ECO:0000313|EMBL:KKQ27320.1}; TaxID=1619046 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_37_14.;"
Methionine adenosyltransferase id=1928565 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
rifoxyb1_full_scaffold_3125_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(6058..6582)
DNA (525bp) protein (175aa)
adenine phosphoribosyltransferase Tax=RBG_13_Woesearchaeota_36_6_curated
Adenine phosphoribosyltransferase id=4384067 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
adenine phosphoribosyltransferase
adenine phosphoribosyltransferase
rifoxyb1_full_scaffold_3125_10
unknown

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6676..7338
DNA (663bp) protein (221aa)

This feature has no annotations

rifoxyb1_full_scaffold_3125_11
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(7342..8616)
DNA (1275bp) protein (425aa)
Beta-lactamase domain protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAC1_METIK
beta-lactamase domain-containing protein
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEF95811.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris
rifoxyb1_full_scaffold_3125_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(8613..8936)
DNA (324bp) protein (108aa)
seg Tax=RBG_13_Woesearchaeota_36_6_curated
seg id=5799865 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Displaying 12 items

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