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rifoxyb1_full_scaffold_2179

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_2179_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2..133
DNA (132bp) protein (44aa)
Putative transcriptional regulator with HTH domain {ECO:0000313|EMBL:KCZ73517.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Can
rifoxyb1_full_scaffold_2179_2
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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466..1737
DNA (1272bp) protein (424aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1041930 species="Archaea; Eu
Histidine--tRNA ligase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I4Z6_METCZ rbh
rifoxyb1_full_scaffold_2179_3

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1786..2694
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I203_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKN57035.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_2179_4
unknown

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comp(2655..2780)
DNA (126bp) protein (42aa)

This feature has no annotations

rifoxyb1_full_scaffold_2179_5

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3066..5057
DNA (1992bp) protein (664aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_2179_6
unknown

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5047..5598
DNA (552bp) protein (184aa)

This feature has no annotations

rifoxyb1_full_scaffold_2179_7
unknown

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5600..10102
DNA (4503bp) protein (1501aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP Tax=AR20
Lytic murein transglycosylase
rifoxyb1_full_scaffold_2179_8
unknown

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10099..10896
DNA (798bp) protein (266aa)

This feature has no annotations

rifoxyb1_full_scaffold_2179_9
AR4, Woesearchaeaota, DPANN, Archaea

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10922..11851
DNA (930bp) protein (310aa)
hypothetical protein id=5044167 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
methyltransferase
methyltransferase
rifoxyb1_full_scaffold_2179_10
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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12050..13792
DNA (1743bp) protein (581aa)
alanine--tRNA ligase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=GWD1_Spirochaetes_27_9_curated
Alanine--tRNA ligase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RSZ5_SPHGB id=5102916 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Alanine-tRNA ligase
Alanine-tRNA ligase
rifoxyb1_full_scaffold_2179_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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13842..14666
DNA (825bp) protein (275aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=5048280 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_2179_12

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comp(14670..14864)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B0BFA
Marine sediment metagenome DNA, contig: S03H2_S21871 {ECO:0000313|EMBL:GAH83229.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative membrane protein
putative membrane protein
rifoxyb1_full_scaffold_2179_13
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(15548..15775)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367D4C7
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein Tax=CG_Woesearch_03
Like-Sm ribonucleoprotein core
Like-Sm ribonucleoprotein core
rifoxyb1_full_scaffold_2179_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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15846..16250
DNA (405bp) protein (135aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8; K02995 small subunit ribosomal protein S8e Tax=RBG_13_Woesearchaeota_36_6_curated
30S ribosomal protein S8e
30S ribosomal protein S8e
rifoxyb1_full_scaffold_2179_15
unknown

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16514..16672
DNA (159bp) protein (53aa)

This feature has no annotations

rifoxyb1_full_scaffold_2179_16
unknown

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comp(16807..16887)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 16 items

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