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rifoxyb1_full_scaffold_2824

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_2824_1
unknown

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comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

rifoxyb1_full_scaffold_2824_2

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comp(131..1147)
DNA (1017bp) protein (339aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO53366.1}; EC=5.4.99.27 {ECO:0000313|EMBL:KHO53366.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
rifoxyb1_full_scaffold_2824_3
CG_Pacearch_03, Pacearchaeota, Archaea

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1226..2056
DNA (831bp) protein (277aa)
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1)
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1)
Phosphonopyruvate decarboxylase-related protein n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EHP6_PYRF1
phosphonopyruvate decarboxylase Tax=CG_Pacearch_03
rifoxyb1_full_scaffold_2824_4

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2064..2402
DNA (339bp) protein (113aa)
phosphoglycerate mutase (PGM) (EC:5.4.2.1)
phosphoglycerate mutase (PGM) (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) n=1 Tax=sediment metagenome RepID=D9PEW1_9ZZZZ
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:KHO50365.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxyb1_full_scaffold_2824_5
unknown

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comp(2391..6311)
DNA (3921bp) protein (1307aa)

This feature has no annotations

rifoxyb1_full_scaffold_2824_6
unknown

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comp(6301..6798)
DNA (498bp) protein (166aa)

This feature has no annotations

rifoxyb1_full_scaffold_2824_7
unknown

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comp(6795..7568)
DNA (774bp) protein (258aa)

This feature has no annotations

rifoxyb1_full_scaffold_2824_8
GWB1_OP11_39_12, Woesebacteria, Microgenomates, Bacteria

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comp(7651..8679)
DNA (1029bp) protein (343aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX1_NITGG
Uncharacterized protein {ECO:0000313|EMBL:KKR01677.1}; TaxID=1618574 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_12.;"
transposase
transposase
rifoxyb1_full_scaffold_2824_9

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8821..9453
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUK4_9ARCH id=5103149 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO52397.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rifoxyb1_full_scaffold_2824_10

Not on your lists

9450..9761
DNA (312bp) protein (104aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E
LSU ribosomal protein L44E {ECO:0000313|EMBL:AJF62429.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_2824_11
CG_Woesearch_01, Woesearchaeota, Archaea

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9764..9934
DNA (171bp) protein (57aa)
30S ribosomal protein S27e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BDH0_METIK
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e Tax=CG_Woesearch_01
30S ribosomal protein S27
30S ribosomal protein S27
rifoxyb1_full_scaffold_2824_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

9931..10731
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 id=5103146 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 Tax=AR17
Translation initiation factor 2 subunit alpha
Translation initiation factor 2 subunit alpha
rifoxyb1_full_scaffold_2824_13
unknown

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10773..10889
DNA (117bp) protein (39aa)

This feature has no annotations

rifoxyb1_full_scaffold_2824_14

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10886..11662
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62425.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 14 items

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