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rifoxyb1_full_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_320_1
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..1268)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Tax=AR17
rifoxyb1_full_scaffold_320_2
RIFOXYB2_FULL_PER_ii_54_17_curated, PER-ii, Bacteria

Not on your lists

comp(1375..3291)
DNA (1917bp) protein (639aa)
Rhs family protein id=5043762 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=RIFOXYB2_FULL_PER_ii_54_17_curated
chitinase
chitinase
rifoxyb1_full_scaffold_320_3
unknown

Not on your lists

comp(3407..4039)
DNA (633bp) protein (211aa)
Haloacid dehalogenase-like hydrolase, putative n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH75_ACIB4 id=5103441 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Haloacid dehalogenase-like hydrolase, putative n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH75_ACIB4 Tax=AR20
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_320_4
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4020..4832)
DNA (813bp) protein (271aa)
translation initiation factor IF-2; K03680 translation initiation factor eIF-2B subunit delta Tax=AR17
translation initiation factor IF-2B subunit delta; K03680 translation initiation factor eIF-2B subunit delta id=5802767 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Ribose-1,5-bisphosphate isomerase
Ribose-1,5-bisphosphate isomerase
rifoxyb1_full_scaffold_320_5
unknown

Not on your lists

comp(4891..5187)
DNA (297bp) protein (99aa)

This feature has no annotations

rifoxyb1_full_scaffold_320_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5265..6977
DNA (1713bp) protein (571aa)
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Woesearch_02
Probable translation initiation factor IF-2 id=5800003 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative translation initiation factor IF-2
putative translation initiation factor IF-2
rifoxyb1_full_scaffold_320_7
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


7034..7429
DNA (396bp) protein (132aa)
30S ribosomal protein S6e n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KWN6_9EURY
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanot
30S ribosomal protein S6
30S ribosomal protein S6
rifoxyb1_full_scaffold_320_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7514..9469)
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376C4AB
hypothetical protein
Tax=AR6
rifoxyb1_full_scaffold_320_9

Not on your lists

9789..10868
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003758432 rbh
Radical SAM protein {ECO:0000313|EMBL:KHO52858.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
radical SAM protein
radical SAM protein
rifoxyb1_full_scaffold_320_10

Not on your lists

11017..11517
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003787FEB
Uncharacterized protein {ECO:0000313|EMBL:KHO53658.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifoxyb1_full_scaffold_320_11
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11524..12081)
DNA (558bp) protein (186aa)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
Uncharacterized protein (Fragment) id=5800258 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifoxyb1_full_scaffold_320_12
unknown

Not on your lists

12217..12378
DNA (162bp) protein (54aa)

This feature has no annotations

rifoxyb1_full_scaffold_320_13
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(12383..13087)
DNA (705bp) protein (235aa)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Nucleoside-diphosphate-sugar pyrophosphorylase id=4188517 bin=GWF2_OP3_38_59 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rifoxyb1_full_scaffold_320_14
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(13089..14504)
DNA (1416bp) protein (472aa)
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=GWA2_WOR_2_45_18_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase id=1812857 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
rifoxyb1_full_scaffold_320_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14599..15390
DNA (792bp) protein (264aa)
rfbM; mannose-1-phosphate guanylyltransferase (EC:2.7.7.13) Tax=CG_Woesearch_02
Nucleotidyl transferase id=5800118 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
rifoxyb1_full_scaffold_320_16
unknown

Not on your lists

comp(15402..16811)
DNA (1410bp) protein (470aa)

This feature has no annotations

rifoxyb1_full_scaffold_320_17

Not on your lists

comp(17107..17751)
DNA (645bp) protein (215aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=[Clostridium] glycolicum RepID=UPI00037D97E0
Marine sediment metagenome DNA, contig: S06H3_L03482 {ECO:0000313|EMBL:GAI13802.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifoxyb1_full_scaffold_320_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

17890..18411
DNA (522bp) protein (174aa)
phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C4421
phosphoglycerate mutase
phosphoglycerate mutase
rifoxyb1_full_scaffold_320_19
Listeria monocytogenes, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18405..19445
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Listeria monocytogenes RepID=UPI00016950F6
hypothetical protein
hypothetical protein
Uncharacterized protein; TaxID=1425336 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria monocytogenes Lm_1840.;"
rifoxyb1_full_scaffold_320_20
GWA2_WWE3_46_9, WWE3, Bacteria

Not on your lists

19447..20043
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Listeria monocytogenes RepID=UPI00037B173C
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKU49351.1}; TaxID=1619111 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWA2_46_9.;"
rifoxyb1_full_scaffold_320_21
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20069..20734
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Bacillus atrophaeus RepID=E3DTK9_BACA1
peptidase
peptidase
Peptidase S51 family protein {ECO:0000313|EMBL:KFK83014.1}; TaxID=1495315 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. niger.;"
rifoxyb1_full_scaffold_320_22
unknown

Not on your lists

comp(20737..21846)
DNA (1110bp) protein (370aa)

This feature has no annotations

rifoxyb1_full_scaffold_320_23
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(22167..22568)
DNA (402bp) protein (134aa)
Histidine triad (HIT) protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGW3_9EURY id=132092 bin=ACD80 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD80 organism_group=SR1
HIT family hydrolase, diadenosine tetraphosphate hydrolase Tax=CG_Aenigma_01
Hit-like protein involved in cell-cycle regulation
Hit-like protein involved in cell-cycle regulation
rifoxyb1_full_scaffold_320_24
R_RIF_OP11_02_38_20, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(22646..23674)
DNA (1029bp) protein (343aa)
Zinc-binding dehydrogenase family protein n=1 Tax=Bacillus sp. HYC-10 RepID=K2NZ17_9BACI
alcohol dehydrogenase GroES domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_38_20_curated
theronine dehydrogenase-like Zn-dependent dehydrogenase
theronine dehydrogenase-like Zn-dependent dehydrogenase
rifoxyb1_full_scaffold_320_25
R_RIF_OP11_02_38_20, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(23681..24793)
DNA (1113bp) protein (371aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_38_20_curated
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI00035ED998 rbh
anthranilate phosphoribosyltransferase
anthranilate phosphoribosyltransferase
rifoxyb1_full_scaffold_320_26
R_OD1_Magasanikbacteria_44_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24793..25845)
DNA (1053bp) protein (351aa)
tryptophanyl-tRNA synthetase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B101
tryptophanyl-tRNA synthetase Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_44_11_curated
rifoxyb1_full_scaffold_320_27
unknown

Not on your lists

comp(26183..27325)
DNA (1143bp) protein (381aa)

This feature has no annotations

rifoxyb1_full_scaffold_320_28
unknown

Not on your lists

comp(27489..28148)
DNA (660bp) protein (220aa)

This feature has no annotations

rifoxyb1_full_scaffold_320_29

Not on your lists

comp(28194..29501)
DNA (1308bp) protein (436aa)
Probable ATP-dependent RNA helicase id=5799626 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:AJF60957.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
putative ATP-dependent RNA helicase
putative ATP-dependent RNA helicase
rifoxyb1_full_scaffold_320_30
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

29671..30393
DNA (723bp) protein (241aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=CG_Woesearch_02
tRNA (Adenine-N(1)-)-methyltransferase id=5800394 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA (Adenine-57, 58-N(1)-) methyltransferase
tRNA (Adenine-57, 58-N(1)-) methyltransferase
Displaying items 1-30 of 63 in total

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