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rifoxyb1_full_scaffold_507

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_507_1
unknown

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comp(2..757)
DNA (756bp) protein (252aa)

This feature has no annotations

rifoxyb1_full_scaffold_507_2

Not on your lists

comp(918..2882)
DNA (1965bp) protein (655aa)
ATP-binding protein (EC:6.3.5.4) id=5049546 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ATP-binding protein {ECO:0000313|EMBL:KHO53882.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KHO53882.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
rifoxyb1_full_scaffold_507_3
unknown

Not on your lists

comp(2927..3370)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM Tax=AR20
hypothetical protein
rifoxyb1_full_scaffold_507_4
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

Not on your lists

comp(3419..4540)
DNA (1122bp) protein (374aa)
id=4379344 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4379344 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifoxyb1_full_scaffold_507_5
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4527..11957)
DNA (7431bp) protein (2477aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW6_9ZZZZ
periplasmic copper-binding protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_507_6
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12137..13108)
DNA (972bp) protein (324aa)
putative circadian clock protein KaiC (EC:2.7.11.1) id=5241500 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RecA-superfamily ATPases implicated in signal transduction Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_507_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13237..13755
DNA (519bp) protein (173aa)
smooth muscle caldesmon
smooth muscle caldesmon
smooth muscle caldesmon id=5241498 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
smooth muscle caldesmon Tax=AR10
rifoxyb1_full_scaffold_507_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13760..15172)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B7C1F
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR17
Protein translocase subunit SecY
Protein translocase subunit SecY
rifoxyb1_full_scaffold_507_9

Not on your lists


comp(15175..15618)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
50S ribosomal protein L15P
rifoxyb1_full_scaffold_507_10

Not on your lists


comp(15620..16114)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719CE9
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
50S ribosomal protein L30P
50S ribosomal protein L30P
rifoxyb1_full_scaffold_507_11

Not on your lists


comp(16089..16844)
DNA (756bp) protein (252aa)
30S ribosomal protein S5 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036370A2
30S ribosomal protein S5, small subunit ribosomal protein S5 {ECO:0000313|EMBL:KHO54252.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
30S ribosomal protein S5
30S ribosomal protein S5
rifoxyb1_full_scaffold_507_12

Not on your lists


comp(16846..17406)
DNA (561bp) protein (187aa)
50S ribosomal protein L18P n=1 Tax=nanoarchaeote Nst1 RepID=R1G9E4_9ARCH
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
50S ribosomal protein L18
rifoxyb1_full_scaffold_507_13

Not on your lists

comp(17403..17861)
DNA (459bp) protein (153aa)
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
50S ribosomal protein L19e id=5800045 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L19e
50S ribosomal protein L19e
rifoxyb1_full_scaffold_507_14

Not on your lists

comp(17858..18364)
DNA (507bp) protein (169aa)
50S ribosomal protein L32e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQL6_9EURY
Large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO51230.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rpl32e; 50S ribosomal protein L32e
rpl32e; 50S ribosomal protein L32e
rifoxyb1_full_scaffold_507_15
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(18366..18905)
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJP1_PYRSN
50S ribosomal protein L6P
50S ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2
rifoxyb1_full_scaffold_507_16

Not on your lists


comp(18907..19299)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=3 Tax=Methanotorris RepID=RS8_METIG id=5103267 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
30S ribosomal protein S8
rifoxyb1_full_scaffold_507_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19311..19541)
DNA (231bp) protein (77aa)
SSU ribosomal protein S14P n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QB90_9EURY id=5103266 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=AR17
SSU ribosomal protein S14P
SSU ribosomal protein S14P
rifoxyb1_full_scaffold_507_18
nanoarchaeote Nst1, Nanoarchaeota, Archaea

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comp(19554..20075)
DNA (522bp) protein (174aa)
50S ribosomal protein L5 n=1 Tax=nanoarchaeote Nst1 RepID=R1G3A2_9ARCH
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1294122 species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
50S ribosomal protein L5
50S ribosomal protein L5
rifoxyb1_full_scaffold_507_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(20077..20781)
DNA (705bp) protein (235aa)
30S ribosomal protein S4e n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HIT6_THES4
SSU ribosomal protein s4e; K02987 small subunit ribosomal protein S4e Tax=RBG_13_Woesearchaeota_36_6_curated
30S ribosomal protein S4e
30S ribosomal protein S4e
rifoxyb1_full_scaffold_507_20

Not on your lists


comp(20783..21166)
DNA (384bp) protein (128aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5046850 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl24p; 50S ribosomal protein L24P
rpl24p; 50S ribosomal protein L24P
rifoxyb1_full_scaffold_507_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(21168..21569)
DNA (402bp) protein (134aa)
50S ribosomal protein L14P n=2 Tax=Methanotorris RepID=F6BD90_METIK id=5103262 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L14b/L23e; K02874 large subunit ribosomal protein L14 Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L14P
50S ribosomal protein L14P
rifoxyb1_full_scaffold_507_22

Not on your lists


comp(21566..21880)
DNA (315bp) protein (105aa)
30S ribosomal protein S17P n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSU2_ARCVS
30S ribosomal protein S17
30S ribosomal protein S17
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS12655.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifoxyb1_full_scaffold_507_23

Not on your lists

comp(21877..22107)
DNA (231bp) protein (77aa)
ribonuclease P protein component 1 (EC:3.1.26.5)
ribonuclease P protein component 1 (EC:3.1.26.5)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035D6FA3
Marine sediment metagenome DNA, contig: S01H1_S33813 {ECO:0000313|EMBL:GAG38101.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifoxyb1_full_scaffold_507_24
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22116..22406)
DNA (291bp) protein (97aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=SUI1_METJA
translation initiation factor Sui1; K03113 translation initiation factor 1 Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
translation initiation factor Sui1
translation initiation factor Sui1
rifoxyb1_full_scaffold_507_25
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(22403..22666)
DNA (264bp) protein (88aa)
50S ribosomal protein L29P n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DUA4_METV3
50S ribosomal protein L29
50S ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus volt
rifoxyb1_full_scaffold_507_26

Not on your lists


comp(22668..23513)
DNA (846bp) protein (282aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQX0_9ZZZZ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
30S ribosomal protein S3
rifoxyb1_full_scaffold_507_27

Not on your lists


comp(23513..23956)
DNA (444bp) protein (148aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5042305 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl22p; 50S ribosomal protein L22P
rpl22p; 50S ribosomal protein L22P
rifoxyb1_full_scaffold_507_28

Not on your lists


comp(23959..24354)
DNA (396bp) protein (132aa)
30S ribosomal protein S19 n=7 Tax=Pyrococcus RepID=RS19_PYRAB id=5103256 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S19
30S ribosomal protein S19
rifoxyb1_full_scaffold_507_29

Not on your lists


comp(24357..25082)
DNA (726bp) protein (242aa)
50S ribosomal protein L2 n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GH07_METTF
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rpl2p; 50S ribosomal protein L2P
rpl2p; 50S ribosomal protein L2P
rifoxyb1_full_scaffold_507_30
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(25084..25347)
DNA (264bp) protein (88aa)
50S ribosomal protein L23P n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=RL23_THEGJ
50S ribosomal protein L23
50S ribosomal protein L23
50S ribosomal protein L23P {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gammatole
Displaying items 1-30 of 34 in total

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