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rifoxyb1_full_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_540_1
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)
hypothetical protein
hypothetical protein Tax=AR13
id=5241058 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifoxyb1_full_scaffold_540_2

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387..1055
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=2 Tax=uncultured archaeon RepID=D1J9M4_9ARCH id=5103866 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63144.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_540_3
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


1115..2356
DNA (1242bp) protein (414aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM id=5103750 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation initiation factor 2 subunit gamma; K03242 translation initiation factor 2 subunit 3 Tax=CG_Woesearch_01
Translation initiation factor 2 subunit gamma
Translation initiation factor 2 subunit gamma
rifoxyb1_full_scaffold_540_4
unknown

Not on your lists

2424..3800
DNA (1377bp) protein (459aa)

This feature has no annotations

rifoxyb1_full_scaffold_540_5
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3797..5104
DNA (1308bp) protein (436aa)
Peptidase M16 domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MH24_ALKOO
peptidase M16 domain-containing protein
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ABW18911.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (stra
rifoxyb1_full_scaffold_540_6
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


comp(5111..10003)
DNA (4893bp) protein (1631aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=Altiarchaeum hamiconexum
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase, A subunit n=1 Tax=Thiovulum sp. ES RepID=J1F984_9HELI
rifoxyb1_full_scaffold_540_7
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(10000..10665)
DNA (666bp) protein (222aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BUS9_ANAMD
haloacid dehalogenase superfamily protein
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:AFM21036.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source
rifoxyb1_full_scaffold_540_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(10655..13780)
DNA (3126bp) protein (1042aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=CG_Pacearch_05
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=4202465 bin=GWF2_OP3_43_52 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rifoxyb1_full_scaffold_540_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

14072..14467
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein; K07158 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_540_10
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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14470..15024
DNA (555bp) protein (185aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
DNA-directed RNA polymerase subunit E
rifoxyb1_full_scaffold_540_11
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

15026..15211
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381271C
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5
DNA-directed RNA polymerase, subunit E
DNA-directed RNA polymerase, subunit E
rifoxyb1_full_scaffold_540_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15213..15521
DNA (309bp) protein (103aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
Ribosomal protein S24E
30S ribosomal protein S24e; K02974 small subunit ribosomal protein S24e Tax=AR17
rifoxyb1_full_scaffold_540_13
Sulfurovum lithotrophicum, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15938..16747
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q7G5_SULNB
Uncharacterized protein {ECO:0000313|EMBL:AKF25477.1}; TaxID=206403 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum lithotrophicum.;"
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_540_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(16760..17332)
DNA (573bp) protein (191aa)
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L15e
50S ribosomal protein L15e
rifoxyb1_full_scaffold_540_15
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

comp(17438..18646)
DNA (1209bp) protein (403aa)
Major facilitator superfamily Tax=RBG_13_OP11_40_15_curated
hypothetical protein id=8366 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
rifoxyb1_full_scaffold_540_16
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

18692..19882
DNA (1191bp) protein (397aa)
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
Uncharacterized protein Tax=AR15
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_540_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

19996..20571
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376F90F
peptidase M50 family Tax=AR18
peptidase M50
peptidase M50
rifoxyb1_full_scaffold_540_18

Not on your lists

comp(20568..21791)
DNA (1224bp) protein (408aa)
Transcription factor E n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HND9_PYRSN id=5102919 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_L06225 {ECO:0000313|EMBL:GAF73174.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Transcription factor E
Transcription factor E
rifoxyb1_full_scaffold_540_19
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

21936..22490
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037102DF
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
rifoxyb1_full_scaffold_540_20
unknown

Not on your lists

22465..22872
DNA (408bp) protein (136aa)

This feature has no annotations

rifoxyb1_full_scaffold_540_21
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

23034..24053
DNA (1020bp) protein (340aa)
Putative antigen protein id=2888714 bin=GWF1_Spirochaetes_51_8 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
antigen p83/100 Tax=GWF1_Spirochaetes_51_8_curated
smc; chromosome segregation protein SMC
smc; chromosome segregation protein SMC
rifoxyb1_full_scaffold_540_22
unknown

Not on your lists

24041..24355
DNA (315bp) protein (105aa)

This feature has no annotations

rifoxyb1_full_scaffold_540_23
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(24337..25185)
DNA (849bp) protein (283aa)
cobalt/zinc/cadmium cation efflux pump protein Tax=RBG_13_Spirochaetes_68_11_curated
Putative cobalt/zinc/cadmium cation efflux pump id=4506793 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cation transporter
cation transporter
rifoxyb1_full_scaffold_540_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(25412..28405)
DNA (2994bp) protein (998aa)
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_Woesearch_02
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AE12B
rifoxyb1_full_scaffold_540_25

Not on your lists

comp(28362..29369)
DNA (1008bp) protein (336aa)
Pyruvate, water dikinase {ECO:0000313|EMBL:KHO53434.1}; EC=2.7.9.2 {ECO:0000313|EMBL:KHO53434.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
ppsA; phosphoenolpyruvate synthase PpsA (EC:2.7.9.2)
ppsA; phosphoenolpyruvate synthase PpsA (EC:2.7.9.2)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AE12B
rifoxyb1_full_scaffold_540_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(29531..30064)
DNA (534bp) protein (178aa)
hypothetical protein
id=5051036 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifoxyb1_full_scaffold_540_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(30061..30660)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000370FF52
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifoxyb1_full_scaffold_540_28

Not on your lists

comp(30679..31887)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BDA7E
Uncharacterized protein {ECO:0000313|EMBL:KKM98854.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA-directed DNA polymerase Reverse transcriptase
RNA-directed DNA polymerase Reverse transcriptase
rifoxyb1_full_scaffold_540_29
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(32138..32977)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000361F1EA
hypothetical protein
Tax=AR6
rifoxyb1_full_scaffold_540_30
unknown

Not on your lists

comp(32979..34736)
DNA (1758bp) protein (586aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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