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rifoxyb1_full_scaffold_815

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_815_1

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195..1112
DNA (918bp) protein (306aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB
Transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_815_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1145..2953
DNA (1809bp) protein (603aa)
Pyrrolo-quinoline quinone (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZEI5_9BACT
BNR repeat domain protein {ECO:0000313|EMBL:AKF09022.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sanda
Pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone
rifoxyb1_full_scaffold_815_3
unknown

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2950..7233
DNA (4284bp) protein (1428aa)

This feature has no annotations

rifoxyb1_full_scaffold_815_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7217..8260)
DNA (1044bp) protein (348aa)
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32); K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] Tax=CG_Woesearch_02
N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifoxyb1_full_scaffold_815_5
unknown

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8309..9148
DNA (840bp) protein (280aa)

This feature has no annotations

rifoxyb1_full_scaffold_815_6

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comp(9138..10031)
DNA (894bp) protein (298aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
RNAse Z
rifoxyb1_full_scaffold_815_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10086..10604
DNA (519bp) protein (173aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FB5D0
tRNA-intron endonuclease
tRNA-intron endonuclease
rifoxyb1_full_scaffold_815_8
AR20, Woesearchaeaota, DPANN, Archaea

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10663..11574
DNA (912bp) protein (304aa)
hypothetical protein
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifoxyb1_full_scaffold_815_9
unknown

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comp(11561..11740)
DNA (180bp) protein (60aa)

This feature has no annotations

rifoxyb1_full_scaffold_815_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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11837..12934
DNA (1098bp) protein (366aa)
Predicted DNA methylase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JEC3_THEKO
hypothetical protein Tax=CG_Aenigma_01
DNA methylase
DNA methylase
rifoxyb1_full_scaffold_815_11
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(12931..13821)
DNA (891bp) protein (297aa)
Putative protease MJ0651; EC=3.4.21.-;; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii
Putative protease MJ0651 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y651_METJA
protease IV SppA
protease IV SppA
rifoxyb1_full_scaffold_815_12
AR15, Woesearchaeaota, DPANN, Archaea

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13949..14155
DNA (207bp) protein (69aa)
30S ribosomal protein S17e id=5800746 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S17e Tax=AR15
rps17E; 30S ribosomal protein S17e
rps17E; 30S ribosomal protein S17e
rifoxyb1_full_scaffold_815_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

14175..14456
DNA (282bp) protein (94aa)
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein Tax=AR6
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5043654 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA/RNA-binding protein albA
DNA/RNA-binding protein albA
rifoxyb1_full_scaffold_815_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

14668..15201
DNA (534bp) protein (178aa)
Tax=AR19
rifoxyb1_full_scaffold_815_15
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(15635..17134)
DNA (1500bp) protein (500aa)
hypothetical protein Tax=CG_Woesearch_03
cytoplasmic protein id=15193062 bin=GWC2_NOV_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_815_16
GWC2_Elusimicrobia_61_19_curated, Elusimicrobia, Bacteria

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comp(17174..17842)
DNA (669bp) protein (223aa)
Adenylate cyclase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PFZ6_9DELT
adenylate/guanylate cyclase domain-containing protein Tax=GWC2_Elusimicrobia_61_19_curated
adenylate/guanylate cyclase domain-containing protein
adenylate/guanylate cyclase domain-containing protein
rifoxyb1_full_scaffold_815_17
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

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comp(18046..18459)
DNA (414bp) protein (138aa)
Histidine triad (HIT) protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THN6_CALNY id=5103048 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
histidine triad family protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
Histidine triad (HIT) protein
Histidine triad (HIT) protein
rifoxyb1_full_scaffold_815_18
unknown

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comp(18452..18628)
DNA (177bp) protein (59aa)

This feature has no annotations

rifoxyb1_full_scaffold_815_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18784..19557
DNA (774bp) protein (258aa)
xylose isomerase (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=CG_Woesearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CCE42
xylose isomerase
xylose isomerase
rifoxyb1_full_scaffold_815_20
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19654..20574)
DNA (921bp) protein (307aa)
RNA methylase (EC:2.1.1.29) Tax=AR17
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2T5_FERPA id=5103608 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase, NOL1/NOP2/sun family
RNA methylase, NOL1/NOP2/sun family
rifoxyb1_full_scaffold_815_21

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comp(20565..21467)
DNA (903bp) protein (301aa)
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61714.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
RNA methylase
RNA methylase
rifoxyb1_full_scaffold_815_22
AR17, Woesearchaeaota, DPANN, Archaea

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comp(21464..21754)
DNA (291bp) protein (97aa)
RNA methyltransferase, trmh family, group 1 Tax=AR17
RNA methyltransferase, TrmH family, group 1 id=5800379 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Displaying 22 items

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