ggKbase home page

rifoxyb1_full_scaffold_1022

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_1022_1
unknown

Not on your lists

comp(1..378)
DNA (378bp) protein (126aa)

This feature has no annotations

rifoxyb1_full_scaffold_1022_2
GWF2_OD1_43_32, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

616..1419
DNA (804bp) protein (268aa)
UPI0003D03DE5 related cluster n=1 Tax=unknown RepID=UPI0003D03DE5
Putative uncharacterized protein Tax=GWF2_OD1_43_32
Metal-dependent hydrolases of the beta-lactamase superfamily I
Metal-dependent hydrolases of the beta-lactamase superfamily I
rifoxyb1_full_scaffold_1022_3
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(1403..2137)
DNA (735bp) protein (245aa)
Aminotransferase, classes I and II id=3025540 bin=GWC1_CPR2_39_9 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Aminotransferase, classes I and II Tax=GWC2_CPR2_39_10
rifoxyb1_full_scaffold_1022_4
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(2138..3715)
DNA (1578bp) protein (526aa)
Pyridoxal-dependent decarboxylase id=3025526 bin=GWC1_CPR2_39_9 species=Streptococcus pneumoniae genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good rbh
Pyridoxal-dependent decarboxylase Tax=GWC2_CPR2_39_10
pyridoxal-dependent decarboxylase
pyridoxal-dependent decarboxylase
rifoxyb1_full_scaffold_1022_5
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3924..10493)
DNA (6570bp) protein (2190aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2A1X5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
regulator of chromosome condensation
regulator of chromosome condensation
rifoxyb1_full_scaffold_1022_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

10657..12438
DNA (1782bp) protein (594aa)
PAS domain S-box Tax=RBG_13_Chloroflexi_51_52_curated
signal transduction histidine kinase id=7200747 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase
rifoxyb1_full_scaffold_1022_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(12428..13057)
DNA (630bp) protein (210aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
endonuclease III n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B6CA7B
rifoxyb1_full_scaffold_1022_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13081..13824)
DNA (744bp) protein (248aa)
Uncharacterized protein id=5799956 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1022_9
unknown

Not on your lists

13934..14431
DNA (498bp) protein (166aa)

This feature has no annotations

rifoxyb1_full_scaffold_1022_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


14511..14708
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Woesearch_02
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5045700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit N
DNA-directed RNA polymerase subunit N
rifoxyb1_full_scaffold_1022_11
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14884..15828
DNA (945bp) protein (315aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZ09_METCG rbh
rifoxyb1_full_scaffold_1022_12

Not on your lists

comp(15874..18495)
DNA (2622bp) protein (874aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG11477.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
rifoxyb1_full_scaffold_1022_13
unknown

Not on your lists

18557..18655
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 13 items

View Taxonomy