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rifoxyb1_full_scaffold_1317

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_1317_1
unknown

Not on your lists

2..133
DNA (132bp) protein (44aa)

This feature has no annotations

rifoxyb1_full_scaffold_1317_2
unknown

Not on your lists

183..944
DNA (762bp) protein (254aa)

This feature has no annotations

rifoxyb1_full_scaffold_1317_3
unknown

Not on your lists

977..1084
DNA (108bp) protein (36aa)

This feature has no annotations

rifoxyb1_full_scaffold_1317_4
unknown

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1120..1710
DNA (591bp) protein (197aa)

This feature has no annotations

rifoxyb1_full_scaffold_1317_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1713..5192)
DNA (3480bp) protein (1160aa)
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Chromosome partition protein Smc Tax=AR15
chromosome segregation protein SMC
chromosome segregation protein SMC
rifoxyb1_full_scaffold_1317_6

Not on your lists

5264..5893
DNA (630bp) protein (210aa)
alpha-ribazole phosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=5047257 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Putative phosphoglycerate mutase {ECO:0000313|EMBL:KHO45429.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
phosphoglycerate mutase
phosphoglycerate mutase
rifoxyb1_full_scaffold_1317_7
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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5928..6884
DNA (957bp) protein (319aa)
Sodium/phosphate symporter n=1 Tax=Pyrococcus sp. ST04 RepID=I3REQ2_9EURY
Sodium/phosphate symporter
Sodium/phosphate symporter
Sodium/phosphate symporter {ECO:0000313|EMBL:AFK22712.1}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
rifoxyb1_full_scaffold_1317_8
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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6928..7605
DNA (678bp) protein (226aa)
Phosphate transport regulator n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIU3_THEBM
phosphate transport regulator
phosphate transport regulator
Phosphate transport regulator {ECO:0000313|EMBL:AHF80943.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinel
rifoxyb1_full_scaffold_1317_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7602..8246)
DNA (645bp) protein (215aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ribonuclease
Ribonuclease
rifoxyb1_full_scaffold_1317_10
CG_Woesearch_02, Woesearchaeota, Archaea

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8350..8895
DNA (546bp) protein (182aa)
rubrerythrin Tax=CG_Woesearch_02
Rubrerythrin id=4129285 bin=GWF2_OP3_38_59 species=Thermoplasmatales archaeon SCGC AB-540-F20 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rubrerythrin
rubrerythrin
rifoxyb1_full_scaffold_1317_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8886..9491
DNA (606bp) protein (202aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=CG_Woesearch_02
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Probable N-glycosylase/DNA lyase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZL6_FERPA
rifoxyb1_full_scaffold_1317_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9507..9890
DNA (384bp) protein (128aa)
dfx; desulfoferrodoxin (2-Fe-SOR) (EC:1.15.1.-); K00519 [EC:1.15.-.-] Tax=CG_Woesearch_02
Desulfoferrodoxin n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JFW7_DESDE
desulfoferrodoxin
desulfoferrodoxin
rifoxyb1_full_scaffold_1317_13
unknown

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10085..10333
DNA (249bp) protein (83aa)

This feature has no annotations

rifoxyb1_full_scaffold_1317_14
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(10528..11706)
DNA (1179bp) protein (393aa)
cytochrome c biogenesis protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
cytochrome c biogenesis protein, transmembrane region id=28322 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
cytochrome c biogenesis transmembrane protein
cytochrome c biogenesis transmembrane protein
rifoxyb1_full_scaffold_1317_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11725..12111)
DNA (387bp) protein (129aa)
NADH oxidoreductase subunit, putative n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A638_PELCD
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
NADH oxidoreductase subunit
NADH oxidoreductase subunit
rifoxyb1_full_scaffold_1317_16
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12314..12937
DNA (624bp) protein (208aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B4L3_TURPD
phosphoesterase PA-phosphatase related protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
phosphoesterase PA-phosphatase related protein
phosphoesterase PA-phosphatase related protein
rifoxyb1_full_scaffold_1317_17

Not on your lists

comp(12923..13780)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AEED3
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
minD3; cell division ATPase MinD3
minD3; cell division ATPase MinD3
rifoxyb1_full_scaffold_1317_18

Not on your lists

comp(13722..14183)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D734E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62947.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_1317_19

Not on your lists

comp(14173..14625)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003645100
hypothetical protein
Marine sediment metagenome DNA, contig: S01H4_L06962 {ECO:0000313|EMBL:GAG84387.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifoxyb1_full_scaffold_1317_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14625..14954)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F928F
Nascent polypeptide-associated complex protein Tax=AR15
Nascent polypeptide-associated complex protein
Nascent polypeptide-associated complex protein
rifoxyb1_full_scaffold_1317_21
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(14957..15118)
DNA (162bp) protein (54aa)
id=5047306 Tax=CG_Woesearch_01
id=5048386 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifoxyb1_full_scaffold_1317_22
unknown

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15650..16060
DNA (411bp) protein (137aa)

This feature has no annotations

rifoxyb1_full_scaffold_1317_23
unknown

Not on your lists

16475..16657
DNA (183bp) protein (61aa)

This feature has no annotations

rifoxyb1_full_scaffold_1317_24

Not on your lists

16672..17799
DNA (1128bp) protein (376aa)
Cadherin domain-containing protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GKW6_METAL
Uncharacterized protein {ECO:0000313|EMBL:KKM22741.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1317_25
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

18006..19550
DNA (1545bp) protein (515aa)
ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=5096060 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Ribonucleoside-diphosphate reductase, ribonucleoside-diphosphate reductase alpha chain {ECO:0000313|EMBL:KKQ68222.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KKQ68222.1};; TaxID=1619066 species="Bacteria; Pereg
ribonucleoside-diphosphate reductase
ribonucleoside-diphosphate reductase
Displaying 25 items

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