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rifoxyb1_full_scaffold_1813

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_1813_1

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2..454
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN62139.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifoxyb1_full_scaffold_1813_2
CG_Pacearch_04, Pacearchaeota, Archaea

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753..1247
DNA (495bp) protein (165aa)
RNA-directed DNA polymerase (reverse transcriptase) (EC:2.7.7.49) Tax=CG_Pacearch_04
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Reverse transcriptase
RNA-directed DNA polymerase Reverse transcriptase
rifoxyb1_full_scaffold_1813_3
AR17, Woesearchaeaota, DPANN, Archaea

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1259..1915
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Tax=AR17
RNA-directed DNA polymerase Reverse transcriptase
RNA-directed DNA polymerase Reverse transcriptase
rifoxyb1_full_scaffold_1813_4
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

1970..2194
DNA (225bp) protein (75aa)
Tax=CG_Pacearch_02
rifoxyb1_full_scaffold_1813_5
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

2179..2517
DNA (339bp) protein (113aa)
hypothetical protein
id=5102994 Tax=CG_Pacearch_02
id=5102994 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyb1_full_scaffold_1813_6
unknown

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comp(2554..2991)
DNA (438bp) protein (146aa)

This feature has no annotations

rifoxyb1_full_scaffold_1813_7
CG_Woesearch_02, Woesearchaeota, Archaea

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3434..3709
DNA (276bp) protein (92aa)
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=CG_Woesearch_02
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta id=5043735 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 1-beta
Elongation factor 1-beta
rifoxyb1_full_scaffold_1813_8
AR18, Woesearchaeaota, DPANN, Archaea

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comp(3701..4435)
DNA (735bp) protein (245aa)
id=5048311 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifoxyb1_full_scaffold_1813_9
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4432..5079)
DNA (648bp) protein (216aa)
family 2 glycosyl transferase id=5049596 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
family 2 glycosyl transferase Tax=AR18
Glycosyltransferase, family GT2
Glycosyltransferase, family GT2
rifoxyb1_full_scaffold_1813_10
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

5126..5785
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376AB69
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR17
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1813_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5782..6615)
DNA (834bp) protein (278aa)
type IV leader peptidase family protein Tax=CG_Woesearch_02
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
Peptidase A24A prepilin type IV
rifoxyb1_full_scaffold_1813_12
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

6717..7787
DNA (1071bp) protein (357aa)
geranylgeranyl reductase Tax=CG_Pacearch_04
geranylgeranyl reductase id=5050661 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Geranylgeranyl reductase
Geranylgeranyl reductase
rifoxyb1_full_scaffold_1813_13
unknown

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comp(7771..8331)
DNA (561bp) protein (187aa)

This feature has no annotations

rifoxyb1_full_scaffold_1813_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(8367..9422)
DNA (1056bp) protein (352aa)
mRNA surveillance protein Pelota Tax=RBG_13_Woesearchaeota_36_6_curated
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
mRNA surveillance protein Pelota
mRNA surveillance protein Pelota
rifoxyb1_full_scaffold_1813_15

Not on your lists

9471..10649
DNA (1179bp) protein (393aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO52403.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
id=5103139 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyb1_full_scaffold_1813_16
unknown

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10805..11974
DNA (1170bp) protein (390aa)

This feature has no annotations

rifoxyb1_full_scaffold_1813_17
unknown

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11971..12909
DNA (939bp) protein (313aa)

This feature has no annotations

rifoxyb1_full_scaffold_1813_18
unknown

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13041..13922
DNA (882bp) protein (294aa)

This feature has no annotations

Displaying 18 items

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