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gwf2_scaffold_332

Alias: PER_GWF2_39_17_5

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Displaying items 31-60 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_332_31
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

39500..42412
DNA (2913bp) protein (971aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=PER_GWF2_39_17
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLR2_9BACT rbh
hypothetical protein
seg (db=Seg db_id=seg from=700 to=715)
gwf2_scaffold_332_32
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

43008..45089
DNA (2082bp) protein (694aa)
Translation initiation factor IF-2 n=4 Tax=Thermoanaerobacterium RepID=D9TLT8_THETC rbh
Translation initiation factor IF-2, translation initiation factor IF-2 {ECO:0000313|EMBL:KKR08661.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_G
translation initiation factor IF-2
seg (db=Seg db_id=seg from=62 to=74)
gwf2_scaffold_332_33
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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45086..46057
DNA (972bp) protein (324aa)
dTDP-glucose 4,6-dehydratase, dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KKR26798.1}; EC=4.2.1.46 {ECO:0000313|EMBL:KKR26798.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Pere
dTDP-glucose 4,6-dehydratase n=2 Tax=Frankia RepID=A8KYU7_FRASN rbh
dTDP-glucose 4,6-dehydratase
DTDP-GLUCOSE 4,6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF41 from=6 to=320 evalue=1.3e-147 interpro_id=IPR005888 interpro_description=dTDP-glucose 4,6-dehydratase GO=Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460), Biological Process: nucleotide-sugar metabolic process (GO:0009225))
gwf2_scaffold_332_34
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

46075..46797
DNA (723bp) protein (241aa)
Glucose-1-phosphate thymidylyltransferase, glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KKR26799.1}; EC=2.7.7.24 {ECO:0000313|EMBL:KKR26799.1};; TaxID=1619064 species="Bacteria; Peregri
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Methanosarcina mazei RepID=Q8PUW2_METMA
(db=HMMPfam db_id=PF00483 from=2 to=229 evalue=1.7e-53 interpro_id=IPR005835 interpro_description=Nucleotidyl transferase GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: nucleotidyltransferase activity (GO:0016779))
gwf2_scaffold_332_35
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

46790..47734
DNA (945bp) protein (315aa)
Adenosine kinase, adenosine kinase {ECO:0000313|EMBL:KKR26800.1}; EC=2.7.1.20 {ECO:0000313|EMBL:KKR26800.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium
adenosine kinase (EC:2.7.1.20)
Adenosine kinase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NII6_DESAR
(db=HMMPfam db_id=PF00294 from=41 to=294 evalue=1.8e-34 interpro_id=IPR011611 interpro_description=Carbohydrate/purine kinase)
gwf2_scaffold_332_36
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(47707..48726)
DNA (1020bp) protein (340aa)
Polysaccharide pyruvyl transferase CsaB n=7 Tax=Thermoanaerobacter RepID=D3T4E1_THEIA
putative polysaccharide pyruvyl transferase Tax=PER_GWF2_39_17
csaB; polysaccharide pyruvyl transferase CsaB
(db=HMMPfam db_id=PF04230 from=15 to=300 evalue=1.1e-35 interpro_id=IPR007345 interpro_description=Polysaccharide pyruvyl transferase)
gwf2_scaffold_332_37
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(48734..49267)
DNA (534bp) protein (178aa)
50S ribosomal protein L19 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YZU2_9BACT
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=PER_GWF2_39_17
rplS; 50S ribosomal protein L19
coiled-coil (db=Coil db_id=coil from=118 to=171 evalue=NA)
gwf2_scaffold_332_38
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(49353..49919)
DNA (567bp) protein (189aa)
DNA polymerase subunit beta n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RUS9_METFO
putative PaaX family transcriptional regulator Tax=PER_GWF2_39_17
nucleotidyltransferase domain-containing protein
coiled-coil (db=Coil db_id=coil from=29 to=54 evalue=NA)
gwf2_scaffold_332_39
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(50205..50459)
DNA (255bp) protein (85aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=73 to=80)
gwf2_scaffold_332_40
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(50471..51748)
DNA (1278bp) protein (426aa)
Trigger factor n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5LAJ5_9BACI
tig; trigger factor; K03545 trigger factor Tax=PER_GWF2_39_17
tig; trigger factor
coiled-coil (db=Coil db_id=coil from=263 to=298 evalue=NA)
gwf2_scaffold_332_41
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

51873..52166
DNA (294bp) protein (98aa)
Uncharacterised protein family UPF0133 Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=14 to=35 evalue=NA)
(db=HMMPfam db_id=PF02575 from=8 to=95 evalue=1.4e-12 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
YbaB-like (db=superfamily db_id=SSF82607 from=7 to=97 evalue=1.3e-12 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
gwf2_scaffold_332_42
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

52175..53191
DNA (1017bp) protein (339aa)
Predicted periplasmic solute-binding protein n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RAG8_THETN
periplasmic solute-binding protein; K07082 UPF0755 protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_332_43
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(53212..54660)
DNA (1449bp) protein (483aa)
FecR protein Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=254 to=265)
(db=HMMPfam db_id=PF04773 from=58 to=155 evalue=2.3e-07 interpro_id=IPR006860 interpro_description=FecR protein)
gwf2_scaffold_332_44
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(54816..56237)
DNA (1422bp) protein (474aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=DNAA_HERA2 rbh
Chromosome replication initiator DnaA, chromosomal replication initiator protein {ECO:0000313|EMBL:KKR26809.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacteriu
dnaA; chromosome replication initiator DnaA
DNAA (db=PatternScan db_id=PS01008 from=432 to=450 evalue=0.0 interpro_id=IPR018312 interpro_description=Chromosomal replication control, initiator DnaA, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA replication origin binding (GO:0003688), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA-dependent DNA replication initiation (GO:0006270), Biological Process: regulation of DNA replication (GO:0006275))
gwf2_scaffold_332_45
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(56285..57103)
DNA (819bp) protein (273aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=PER_GWF2_39_17
deoxyribonuclease (ycfH) (EC:3.1.21.-)
Putative deoxyribonuclease (YcfH) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEP1_9BACT
TATD_1 (db=PatternScan db_id=PS01137 from=2 to=10 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
gwf2_scaffold_332_46
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

57169..59580
DNA (2412bp) protein (804aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=360 to=388 evalue=NA)
seg (db=Seg db_id=seg from=89 to=100)
gwf2_scaffold_332_47
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

59744..61054
DNA (1311bp) protein (437aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=129 to=144)
gwf2_scaffold_332_48
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

61079..61516
DNA (438bp) protein (146aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_332_49
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

61526..65518
DNA (3993bp) protein (1331aa)
BRICHOS domain Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=102 to=123 evalue=NA)
seg (db=Seg db_id=seg from=379 to=412)
BRICHOS (db=ProfileScan db_id=PS50869 from=1301 to=1330 evalue=8.861 interpro_id=IPR007084 interpro_description=BRICHOS domain)
gwf2_scaffold_332_50
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

65895..66647
DNA (753bp) protein (251aa)
Uncharacterized protein (Fragment) n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) RepID=K5VP83_PHACS
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=170)
gwf2_scaffold_332_51
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(66885..67142)
DNA (258bp) protein (86aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_332_52
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

67280..68299
DNA (1020bp) protein (340aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=PER_GWF2_39_17
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GJA1_CALEA
hypothetical protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=95 to=294 evalue=2.3e-12)
gwf2_scaffold_332_53
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(68285..69451)
DNA (1167bp) protein (389aa)
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) n=2 Tax=Brevibacillus RepID=J2HTX2_9BACL
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=119 to=379 evalue=1.9e-14)
gwf2_scaffold_332_54
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

69705..70490
DNA (786bp) protein (262aa)
ComF family protein, putative n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z6I8_DEHE1
comF family protein Tax=PER_GWF2_39_17
competence protein ComF
(db=HMMPfam db_id=PF00156 from=164 to=249 evalue=1.3e-08 interpro_id=IPR000836 interpro_description=Phosphoribosyltransferase GO=Biological Process: nucleoside metabolic process (GO:0009116))
gwf2_scaffold_332_55
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

70513..71646
DNA (1134bp) protein (378aa)
Putative glycosyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I600_CALAS
putative glycosyltransferase Tax=PER_GWF2_39_17
putative glycosyltransferase
seg (db=Seg db_id=seg from=166 to=180)
gwf2_scaffold_332_56
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

71643..72734
DNA (1092bp) protein (364aa)
Glycosyltransferase n=3 Tax=Clostridium acetobutylicum RepID=F0K6V5_CLOAE
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKR23369.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
glycosyl transferase group 1
(db=HMMPfam db_id=PF00534 from=191 to=333 evalue=1.4e-29 interpro_id=IPR001296 interpro_description=Glycosyl transferase, family 1 GO=Biological Process: biosynthetic process (GO:0009058))
gwf2_scaffold_332_57
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(72714..73346)
DNA (633bp) protein (211aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_332_58
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

73479..74975
DNA (1497bp) protein (499aa)
Polymerase III subunit gamma and tau, DNA polymerase III subunit gamma/tau protein {ECO:0000313|EMBL:KKR08687.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KKR08687.1};; TaxID=1619067 species="Bacteria; Peregrinib
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=Thermincola potens (strain JR) RepID=D5X8W4_THEPJ rbh
(db=HMMPfam db_id=PF12169 from=232 to=292 evalue=1.2e-06 interpro_id=IPR022754 interpro_description=DNA polymerase III, gamma subunit, domain III GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887))
gwf2_scaffold_332_59
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

74984..76282
DNA (1299bp) protein (433aa)
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase, dihydrofolate synthase / folylpolyglutamate synthase {ECO:0000313|EMBL:KKR25715.1}; EC=6.3.2.12 {ECO:0000313|EMBL:KKR25715.1};; TaxID=1
FolC bifunctional protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TN35_ALKMQ
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
FOLYLPOLYGLU_SYNT_2 (db=PatternScan db_id=PS01012 from=146 to=161 evalue=0.0 interpro_id=IPR018109 interpro_description=Folylpolyglutamate synthetase, conserved site GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid-containing compound biosynthetic process (GO:0009396))
gwf2_scaffold_332_60
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

76446..76994
DNA (549bp) protein (183aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=2 to=26)
Displaying items 31-60 of 110 in total

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