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rifcsphigho2_01_scaffold_4278

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4278_1
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(223..1839)
DNA (1617bp) protein (539aa)
60 kDa chaperonin n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFZ7_9EURY rbh
groEL; chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1094980 species="Archaea; Euryarchaeota; Me
rifcsphigho2_01_scaffold_4278_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1836..2126)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=CH10_METBF
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1434106 species="Archaea; Euryarchaeota; Me
Heat shock protein 60 family co-chaperone GroES
rifcsphigho2_01_scaffold_4278_3
unknown

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2523..3365
DNA (843bp) protein (281aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4278_4
AR4, Woesearchaeaota, DPANN, Archaea

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comp(3413..4312)
DNA (900bp) protein (300aa)
seg id=5043957 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_01_scaffold_4278_5
unknown

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comp(4412..4924)
DNA (513bp) protein (171aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4278_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5127..6287)
DNA (1161bp) protein (387aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_4278_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6378..8180)
DNA (1803bp) protein (601aa)
serine protease-like protein; K06870 uncharacterized protein Tax=CG_Woesearch_02
serine protease; K06870 uncharacterized protein id=5049207 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
serine protease-like protein
rifcsphigho2_01_scaffold_4278_8

Not on your lists

8284..8508
DNA (225bp) protein (75aa)
hypothetical protein id=5048664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45327.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_4278_9

Not on your lists

8508..8741
DNA (234bp) protein (78aa)
hypothetical protein; K07339 hypothetical protein id=5048663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45326.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_4278_10
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8873..9862
DNA (990bp) protein (330aa)
Phospholipase, patatin family, putative id=3523189 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
alpha-beta hydrolase family esterase; K07001 NTE family protein Tax=GWC2_Pelobacteraceae_58_13_curated
patatin
rifcsphigho2_01_scaffold_4278_11
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(9944..10387)
DNA (444bp) protein (148aa)
NMD protein affecting ribosome stability and mRNA decay n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U9C7_9EURY
NMD protein affecting ribosome stability and mRNA decay {ECO:0000313|EMBL:EMR75375.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales arc
rifcsphigho2_01_scaffold_4278_12
unknown

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10398..10700
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4278_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

10755..11189
DNA (435bp) protein (145aa)
prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=AR9
pfdA; prefoldin subunit alpha; K04797 prefoldin alpha subunit id=18313428 bin=Nanosalina tax=Nanosalina
prefoldin subunit alpha
rifcsphigho2_01_scaffold_4278_14

Not on your lists

11161..12429
DNA (1269bp) protein (423aa)
Fused signal recognition particle receptor {ECO:0000313|EMBL:KHO49424.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Signal recognition particle GTPase id=5800589 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Signal recognition particle GTPase
rifcsphigho2_01_scaffold_4278_15
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12504..13925
DNA (1422bp) protein (474aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Para
Aspartokinase n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YWP8_9ALTE
aspartate kinase III
rifcsphigho2_01_scaffold_4278_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13995..14891
DNA (897bp) protein (299aa)
phnX; Phosphonoacetaldehyde hydrolase (Phosphonatase); K05306 phosphonoacetaldehyde hydrolase [EC:3.11.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037F88E9
phosphonoacetaldehyde hydrolase
rifcsphigho2_01_scaffold_4278_17
unknown

Not on your lists

comp(14836..15708)
DNA (873bp) protein (291aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4278_18
unknown

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comp(15705..16451)
DNA (747bp) protein (249aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4278_19

Not on your lists

16958..18232
DNA (1275bp) protein (425aa)
MiaB-like protein tRNA modifying enzyme {ECO:0000313|EMBL:KHO49419.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
MiaB-like tRNA modifying enzyme id=5800532 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_4278_20
unknown

Not on your lists

comp(18264..18899)
DNA (636bp) protein (212aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4278_21
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18945..19529)
DNA (585bp) protein (195aa)
Tax=AR9
rifcsphigho2_01_scaffold_4278_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19628..20140)
DNA (513bp) protein (171aa)
hypothetical protein
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_4278_23
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

20287..20925
DNA (639bp) protein (213aa)
small GTP-binding protein; K06883 Tax=AR9
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
rifcsphigho2_01_scaffold_4278_24
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

21074..21484
DNA (411bp) protein (137aa)
hypothetical protein; K09743 hypothetical protein Tax=AR9
hypothetical protein
Putative uncharacterized protein id=5044929 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_4278_25
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

21487..21861
DNA (375bp) protein (125aa)
hypothetical protein; K07163 Tax=AR9
hypothetical protein; K07163 id=5044928 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Zn-ribbon containing protein
rifcsphigho2_01_scaffold_4278_26
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

22235..22564
DNA (330bp) protein (110aa)
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZ43_9BACT
pterin-4-alpha-carbinolamine dehydratase Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
rifcsphigho2_01_scaffold_4278_27
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22576..22980)
DNA (405bp) protein (135aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein Tax=AR9
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ZPR1-like protein zinc finger protein
rifcsphigho2_01_scaffold_4278_28
unknown

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23121..23438
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 28 items

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