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rifcsplowo2_01_scaffold_3857_4

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_32_14

partial RP 27 / 55 MC: 6 BSCG 15 / 51 ASCG 23 / 38 MC: 2
Location: comp(1009..1815)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 260.0
  • Bit_score: 245
  • Evalue 6.10e-62
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=CG_Pacearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 268.0
  • Bit_score: 360
  • Evalue 2.40e-96
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 260.0
  • Bit_score: 245
  • Evalue 1.70e-62

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Taxonomy

CG_Pacearch_02 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 807
ATGGAAATATCAAATTTAACAAAAGAAACACTAATAAGAATGTTTAAAGAAGGAAAGAGATTCGATTCTCGACAGTTAACAGAATTAAGAGATATAGAAGTTTCATATAATGTTTCTAATAAGGCAGAAGGATCTGCAAGAGTAAAAATAGGAAAGACCGAAGTAGTTGTCGGAGTAAAAATGGCTATGGGCGAACCATATCCAGATTCTCCAGATAAGGGAAACTTAACAGTTTCTGCAGATTTATTACCTTTAGCTTCTCCAAGATTCGAAATGGGTCCTCCAGATTTTCCAGGAATAGAATTGCCAAGACTAGTTGATAGAATTATAAGAGAGTCACATATAATTCAGCTTGACAAACTGGTGATTAAAGAAGGCGAAAAGGTCTGGACAGTTTTCATTGACGTCTATCCTATTAATGATGATGGAAATTTAATTGATGCTGCATCTTTAGGCGCAGTCGCAGCATTAAAAAATGCAAAAATTCCAATGCTGGATAAAGATGGAAAGATAGACTATGACAAAGATTCAAAAGAAAGCATTCCATTAACAAAAGATATTTCCCCGCTGTCTTTCAGCTTCTTTAAAATAGGAGATTCGGTAATTTTAGATCCTACAAGAGAAGAAGAAGAAGCAGCAGACGCAAGAATTACATTTGGAATTTCAAAGTGGAATGGTCAATATGTAATAAACTCATGCCAAAAATCAGGAGAAGAACCTCTTACCCAAGCAGAAATAGAAAATATGATGTCTGTTATAACAAAAAAATTTGATGAGGTTACCCAAAAGCTTAAAAAATATATTTAA
PROTEIN sequence
Length: 269
MEISNLTKETLIRMFKEGKRFDSRQLTELRDIEVSYNVSNKAEGSARVKIGKTEVVVGVKMAMGEPYPDSPDKGNLTVSADLLPLASPRFEMGPPDFPGIELPRLVDRIIRESHIIQLDKLVIKEGEKVWTVFIDVYPINDDGNLIDAASLGAVAALKNAKIPMLDKDGKIDYDKDSKESIPLTKDISPLSFSFFKIGDSVILDPTREEEEAADARITFGISKWNGQYVINSCQKSGEEPLTQAEIENMMSVITKKFDEVTQKLKKYI*