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rifcsplowo2_01_scaffold_3857

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3857_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

2..157
DNA (156bp) protein (52aa)
hypothetical protein id=5046020 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
rifcsplowo2_01_scaffold_3857_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

150..422
DNA (273bp) protein (91aa)
Addiction module toxin, RelE/StbE family
Addiction module toxin, RelE/StbE family id=5047353 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Addiction module toxin, RelE/StbE family Tax=AR18
rifcsplowo2_01_scaffold_3857_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(601..996)
DNA (396bp) protein (132aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
hypothetical protein
rifcsplowo2_01_scaffold_3857_4
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(1009..1815)
DNA (807bp) protein (269aa)
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=CG_Pacearch_02
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_3857_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1815..2546)
DNA (732bp) protein (244aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Exosome complex exonuclease 1; K11600 exosome complex component RRP41 Tax=CG_Pacearch_06
exosome complex exonuclease Rrp41
rifcsplowo2_01_scaffold_3857_6
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(2548..3276)
DNA (729bp) protein (243aa)
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 Tax=CG_Pacearch_02
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_3857_7
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(3391..4059)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829AF7
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_02
Shwachman-Bodian-diamond syndrome protein
rifcsplowo2_01_scaffold_3857_8
unknown

Not on your lists

4147..4359
DNA (213bp) protein (71aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3857_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

4434..5159
DNA (726bp) protein (242aa)
proteasome endopeptidase complex, alpha subunit (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_02
Proteasome subunit alpha id=5800797 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proteasome subunit alpha
rifcsplowo2_01_scaffold_3857_10
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

5202..5606
DNA (405bp) protein (135aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGH8_ARCPA
Protein tyrosine phosphatase Tax=RBG_16_Micrarchaeota_49_10_curated
protein-tyrosine phosphatase, low molecular weight
rifcsplowo2_01_scaffold_3857_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5607..6017)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHL1_THEBM
hypothetical protein Tax=CG_Pacearch_03
Hypothetical protein
rifcsplowo2_01_scaffold_3857_12
unknown

Not on your lists

6142..6393
DNA (252bp) protein (84aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3857_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(6401..7792)
DNA (1392bp) protein (464aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=CG_Pacearch_03
Protein translocase subunit SecY
rifcsplowo2_01_scaffold_3857_14

Not on your lists


comp(7822..8211)
DNA (390bp) protein (130aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
rifcsplowo2_01_scaffold_3857_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(8208..8525)
DNA (318bp) protein (106aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_3857_16
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(8527..8949)
DNA (423bp) protein (141aa)
50S ribosomal protein L30P n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV3_FERPA
ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=CG_Pacearch_02
ribosomal protein L30P
rifcsplowo2_01_scaffold_3857_17
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(8946..9755)
DNA (810bp) protein (270aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Pacearch_02
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
rifcsplowo2_01_scaffold_3857_18

Not on your lists


comp(9755..10234)
DNA (480bp) protein (160aa)
50S ribosomal protein L18P n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QQR0_VULDI
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
rifcsplowo2_01_scaffold_3857_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10231..10641)
DNA (411bp) protein (137aa)
50S ribosomal protein L19e n=1 Tax=Thermofilum sp. 1910b RepID=S6A587_9CREN
50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=CG_Pacearch_06
LSU ribosomal protein L19e
rifcsplowo2_01_scaffold_3857_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10638..10988)
DNA (351bp) protein (117aa)
50S ribosomal protein L32e n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GH20_METTF
ribosomal protein L32e Rpl32e
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_3857_21

Not on your lists


comp(10988..11530)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RL6_THEKO
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12542.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
rifcsplowo2_01_scaffold_3857_22

Not on your lists


comp(11530..11904)
DNA (375bp) protein (125aa)
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12191.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8, small subunit ribosomal protein S8
rps8p; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5241366 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_3857_23

Not on your lists


comp(12138..12701)
DNA (564bp) protein (188aa)
50S ribosomal protein L5 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD2_METFV
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12526.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
rifcsplowo2_01_scaffold_3857_24
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


comp(12698..13324)
DNA (627bp) protein (209aa)
30S ribosomal protein S4e n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AQS7_FERAC
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e Tax=CG_Pacearch_03
30S ribosomal protein S4e
rifcsplowo2_01_scaffold_3857_25

Not on your lists


comp(13293..13775)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P
rifcsplowo2_01_scaffold_3857_26

Not on your lists


comp(13772..14173)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5046849 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_3857_27

Not on your lists


comp(14274..14609)
DNA (336bp) protein (112aa)
30S ribosomal protein S17P n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9S7_STAHD
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
rifcsplowo2_01_scaffold_3857_28
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(14639..14938)
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUI1_ARCFU
translation initiation factor SUI1; K03113 translation initiation factor 1 Tax=CG_Pacearch_03
translation initiation factor Sui1
rifcsplowo2_01_scaffold_3857_29
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(14935..15141)
DNA (207bp) protein (69aa)
Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_3857_30

Not on your lists


comp(15141..15830)
DNA (690bp) protein (230aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GT23_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12642.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
Displaying items 1-30 of 42 in total

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