ggKbase home page

rifcsplowo2_01_scaffold_3857_5

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_32_14

partial RP 27 / 55 MC: 6 BSCG 15 / 51 ASCG 23 / 38 MC: 2
Location: comp(1815..2546)

Top 3 Functional Annotations

Value Algorithm Source
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 229.0
  • Bit_score: 263
  • Evalue 2.60e-67
Exosome complex exonuclease 1; K11600 exosome complex component RRP41 Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 227.0
  • Bit_score: 352
  • Evalue 4.50e-94
exosome complex exonuclease Rrp41 similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 229.0
  • Bit_score: 263
  • Evalue 7.20e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 732
ATGGCAAAAGAAAAAGAATCAAGTTTTAAGCGTTCAGACGGAAGAAAATTAAATGAAATGAGACCGATGATAGCAAAAGTGGGAATCATTCCAAATGCAGATGGGTCAGCAATGTTTACATTTGGAAACACAATAGCCATTGCAGCAGTTTATGGTCCAAGAAAGTTGCATCCACAGCACATGCAGAATCCTCAAAAAGCAGTTTTAAGATGTAATTACGATCTTTTGAGTTTTTCAGTTTCAGATAGAAAGAAACCTGGTCCAAGTAGAAGATCACAGGAAATCTCTAAAGTTACAGAGTGGGCATTGTCTCCAGCATTAGATTTAAATTCATTTCCAAACACAGTTGTAGATGTCCAAATCTATATTCTTCAGGCCGATGCAGGAACAAGAACTGCTGGAATTAATGCAGCATCTTTAGCTTTAGCTCATGCAGGCATTCCAATGAGAGATCTTATTTGTTCAGTTGCAGTTGGGAAATTAGATAAAAATCTTGTAGTAGATTTAACAAAAGAAGAAGAAGACTTTGAAGAAGGAGAGGGCGCGACAGATTTTGCAATGGCAAAAATAGCAAATTCAGACGAATTTACACTAATGCAATTAGATGGAAAAATCCAGCCAGAAGTAATAAATGAAGTGACAAAATTAGCTACAGAAGCATGTAAACAAATATATGAAGTTCAGAAAAAAGCGCTAAAAGATGTTGTTGAATCTAATGGAGGAAAAAAATAA
PROTEIN sequence
Length: 244
MAKEKESSFKRSDGRKLNEMRPMIAKVGIIPNADGSAMFTFGNTIAIAAVYGPRKLHPQHMQNPQKAVLRCNYDLLSFSVSDRKKPGPSRRSQEISKVTEWALSPALDLNSFPNTVVDVQIYILQADAGTRTAGINAASLALAHAGIPMRDLICSVAVGKLDKNLVVDLTKEEEDFEEGEGATDFAMAKIANSDEFTLMQLDGKIQPEVINEVTKLATEACKQIYEVQKKALKDVVESNGGKK*