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rifcsplowo2_01_scaffold_3857_6

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_32_14

partial RP 27 / 55 MC: 6 BSCG 15 / 51 ASCG 23 / 38 MC: 2
Location: comp(2548..3276)

Top 3 Functional Annotations

Value Algorithm Source
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 222.0
  • Bit_score: 200
  • Evalue 1.60e-48
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 Tax=CG_Pacearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 241.0
  • Bit_score: 362
  • Evalue 4.30e-97
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 221.0
  • Bit_score: 200
  • Evalue 4.40e-49

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Taxonomy

CG_Pacearch_02 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 729
ATGAGAAACGATATTAATGAGGCACACGATGCCGAGGAAGACATTTCTTCTAGCGGTTCTGACGAATCTAAAAAAAGAAAGGTAGTCGTACCAGGTGAAGTAATAGTTTCTGGAGAAGATTACTTGCCAGGAGAAGGAGCCAAAAGATTAGGAGAAAACATTATTTCTATAAGATTTGGTTTAGCAGAGGAACTTGGAAGAGTTATAAAAGTAATCCCTATTTTCGGAGCCTTCGTTCCGAGAAGAAATAATGTAATTATAGGCAGGGTCACAGATATCACATTTTATGGCTGGCTTTTAGATATCGATTCAGCTTCAAGCGCATTTCTTCCAATAGAAGAATCCCCAAGATTTGTAAACAAAAATGAAATGGAGCAATTTTTGGCAATAGGGGATGTAGTTTCAGCAAAGATATGGAGTGTAAAGAGCAAAGGAATAGATTTAACACTTAAAGGAAAAGGTCTTGGTAAATTAGAAGGCGGATTCATATTCAGAGTAATTCCTTCAAGAGTCCCAAGAGTTATAGGCAGAGAAGGATCAATGATAAATCTAATAAAAGACAAGACAGGTTGCCAAATAACTGTAGGGCAAAATGGATGGATTTGGATAAAAGGAGATAATGTAGATGCGGAAATAAAAGCAAGAAAAGCAATAGAATTTGTCACAGATAAAGTTCATATAGAAGGTTTAACGGACAAAGTTGAAAAATGGTTTGAGGAGAACAAATAA
PROTEIN sequence
Length: 243
MRNDINEAHDAEEDISSSGSDESKKRKVVVPGEVIVSGEDYLPGEGAKRLGENIISIRFGLAEELGRVIKVIPIFGAFVPRRNNVIIGRVTDITFYGWLLDIDSASSAFLPIEESPRFVNKNEMEQFLAIGDVVSAKIWSVKSKGIDLTLKGKGLGKLEGGFIFRVIPSRVPRVIGREGSMINLIKDKTGCQITVGQNGWIWIKGDNVDAEIKARKAIEFVTDKVHIEGLTDKVEKWFEENK*