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S36_SO-2_scaffold_134014

Search features with annotation key words

Displaying items 241-270 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_134014_237
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(220380..221909)
DNA (1530bp) protein (510aa)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=uncultured bacterium RepID=K2CY36_9BACT
guaA; GMP synthase
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
S36_SO-2_scaffold_134014_238
unknown

Not on your lists

comp(221906..222799)
DNA (894bp) protein (298aa)

This feature has no annotations

S36_SO-2_scaffold_134014_239
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(223015..223965)
DNA (951bp) protein (317aa)
hprA; glycerate dehydrogenase (EC:1.1.1.29)
Phosphoglycerate dehydrogenase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TAU9_ACIB4 id=5088299 bin=OP11_3 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
S36_SO-2_scaffold_134014_240
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(223973..225100)
DNA (1128bp) protein (376aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T917_9EURY
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) {ECO:0000313|EMBL:EMR73393.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
S36_SO-2_scaffold_134014_241
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(225120..226184)
DNA (1065bp) protein (355aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-] id=5802891 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
phosphoribosylaminoimidazolecarboxamide formyltransferase
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
S36_SO-2_scaffold_134014_242

Not on your lists

comp(226227..227621)
DNA (1395bp) protein (465aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Adenylosuccinate lyase {ECO:0000313|EMBL:KHO46482.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KHO46482.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
fumarate lyase
S36_SO-2_scaffold_134014_243
GWA2_PER_47_7, Peregrinibacteria, Bacteria

Not on your lists

comp(227618..228598)
DNA (981bp) protein (327aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=5802329 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000313|EMBL:KKU80457.1}; TaxID=1619058 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_47_7.;"
S36_SO-2_scaffold_134014_244
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(228595..229260)
DNA (666bp) protein (222aa)
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
Phosphorylated carbohydrates phosphatase {ECO:0000313|EMBL:AIS52963.1}; EC=3.1.3.- {ECO:0000313|EMBL:AIS52963.1};; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
Haloacid dehalogenase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKV1_CLOSH
S36_SO-2_scaffold_134014_245
AR11, Woesearchaeaota, DPANN, Archaea

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comp(229253..230053)
DNA (801bp) protein (267aa)
purE; putative phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5045875 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
Tax=AR11
S36_SO-2_scaffold_134014_246
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(230058..230840)
DNA (783bp) protein (261aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase I, putative id=3834869 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=CG_Elusi_03
S36_SO-2_scaffold_134014_247
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

comp(230956..233868)
DNA (2913bp) protein (971aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6R1_9BACT
Tax=CG_Omnitr_04
S36_SO-2_scaffold_134014_248
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(233858..234880)
DNA (1023bp) protein (341aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1535750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2-1.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
phosphoribosylformylglycinamidine cyclo-ligase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=5240833 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S36_SO-2_scaffold_134014_249
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(234877..235722)
DNA (846bp) protein (282aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=FOLD_MOOTA
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_250
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(235885..237216)
DNA (1332bp) protein (444aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=2823248 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_251
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(237230..237985)
DNA (756bp) protein (252aa)
transmembrane_regions id=5044053 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_252
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(237996..238559)
DNA (564bp) protein (188aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thermincola potens (strain JR) RepID=D5XCI0_THEPJ
5-formyltetrahydrofolate cyclo-ligase
S36_SO-2_scaffold_134014_253
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238556..240667)
DNA (2112bp) protein (704aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LR97_SYNAS
Tax=RBG_16_Deltaproteobacteria_44_11_curated
S36_SO-2_scaffold_134014_254
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(240701..242155)
DNA (1455bp) protein (485aa)
Amidophosphoribosyltransferase id=3259895 bin=GWA1_Deltaproteobacteria_52_35 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
purF; amidophosphoribosyltransferase
Tax=GWA1_Bdellovibrionales_52_35_curated
S36_SO-2_scaffold_134014_255
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242406..243707
DNA (1302bp) protein (434aa)
Folylpolyglutamate synthase (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U7E0_9EURY
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
S36_SO-2_scaffold_134014_256

Not on your lists

comp(243691..244401)
DNA (711bp) protein (237aa)
id=5046296 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46097.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_134014_257
R_OP11_Gottesmanbacteria_39_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

244455..245180
DNA (726bp) protein (242aa)
short-chain dehydrogenase/reductase SDR id=5084635 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
dihydropteridine reductase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
S36_SO-2_scaffold_134014_258
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(245177..246430)
DNA (1254bp) protein (418aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3)
AICARFT/IMPCHase bienzyme, formylation region id=4127994 bin=GWF2_Nitrospirae_44_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=GWF2_Nitrospirae_44_13_curated
S36_SO-2_scaffold_134014_259
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246433..247083)
DNA (651bp) protein (217aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3)
Phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000313|EMBL:ABW67319.1}; EC=2.1.2.3 {ECO:0000313|EMBL:ABW67319.1};; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
Phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZG6_DESOH
S36_SO-2_scaffold_134014_260
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(247080..248474)
DNA (1395bp) protein (465aa)
chy:CHY_2670 purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] id=53910 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
adenylosuccinate synthase
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
S36_SO-2_scaffold_134014_261
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

248567..249301
DNA (735bp) protein (245aa)
PRPP-binding protein, adenine/guanine phosphoribosyltransferase n=1 Tax=Natronococcus occultus SP4 RepID=L0K0J8_9EURY
PRPP-binding protein, adenine/guanine phosphoribosyltransferase
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_262
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(249309..249818)
DNA (510bp) protein (170aa)
Phosphodiesterase, MJ0936 family id=3063499 bin=GWF2_CPR3_35_18 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWF2_CPR3_35_18 organism_group=CPR3
putative metallo-dependent phosphatase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
S36_SO-2_scaffold_134014_263
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(249796..250023)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003707988
hypothetical protein
Tax=CG_Woesearch_01
S36_SO-2_scaffold_134014_264
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(250061..250903)
DNA (843bp) protein (281aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KHE93718.1}; EC=4.1.1.23 {ECO:0000313|EMBL:KHE93718.1};; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5041874 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
S36_SO-2_scaffold_134014_265

Not on your lists

comp(250900..251508)
DNA (609bp) protein (203aa)
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein containing YHS protein {ECO:0000313|EMBL:AJF60943.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S36_SO-2_scaffold_134014_266
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(251602..252102)
DNA (501bp) protein (167aa)
id=5044628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying items 241-270 of 272 in total

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