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gwa2_scaffold_503

Alias: GW2011_AR4_8

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_503_1
AR4, Woesearchaeaota, DPANN, Archaea

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322..1560
DNA (1239bp) protein (413aa)
Protein kinase family protein n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EE30_THECK
Protein kinase family protein Tax=AR4
no description (db=HMMSmart db_id=SM00219 from=22 to=229 evalue=0.00012 interpro_id=IPR020635 interpro_description=Tyrosine-protein kinase, catalytic domain GO=Molecular Function: protein tyrosine kinase activity (GO:0004713), Biological Process: protein phosphorylation (GO:0006468))
(db=HMMPfam db_id=PF07714 from=26 to=190 evalue=1.1e-12 interpro_id=IPR001245 interpro_description=Serine-threonine/tyrosine-protein kinase catalytic domain GO=Molecular Function: protein kinase activity (GO:0004672), Biological Process: protein phosphorylation (GO:0006468))
gwa2_scaffold_503_2
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1566..2126)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor n=4 Tax=Mobiluncus curtisii RepID=D6ZJ10_MOBCV
rpoE; RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=AR4
rpoE; RNA polymerase sigma factor RpoE
(db=HMMPfam db_id=PF04542 from=21 to=81 evalue=1.1e-12 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
gwa2_scaffold_503_3
AR4, Woesearchaeaota, DPANN, Archaea

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comp(2247..3737)
DNA (1491bp) protein (497aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=AR4
Putative thymidine phosphorylase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMM0_THEBM
thymidine phosphorylase
seg (db=Seg db_id=seg from=323 to=334)
gwa2_scaffold_503_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3734..4753)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2W1_RHOP2
hypothetical protein Tax=AR4
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
gwa2_scaffold_503_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4788..5219)
DNA (432bp) protein (144aa)
transmembrane_regions Tax=AR4
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
seg (db=Seg db_id=seg from=20 to=30)
gwa2_scaffold_503_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5502..6959)
DNA (1458bp) protein (486aa)
lysC; aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] Tax=AR4
Aspartokinase n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F5Q0_9ACTN
Aspartokinase
ASPARTOKINASE (db=PatternScan db_id=PS00324 from=6 to=14 evalue=0.0 interpro_id=IPR018042 interpro_description=Aspartate kinase, conserved site GO=Molecular Function: aspartate kinase activity (GO:0004072), Biological Process: cellular amino acid biosynthetic process (GO:0008652))
gwa2_scaffold_503_7
AR4, Woesearchaeaota, DPANN, Archaea

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comp(6980..8110)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Methanosarcina RepID=Q8TU78_METAC
hypothetical protein Tax=AR4
hypothetical protein
gb def: Hypothetical protein MA0195 (db=HMMPanther db_id=PTHR14741:SF3 from=70 to=233 evalue=1.0e-66)
gwa2_scaffold_503_8
AR4, Woesearchaeaota, DPANN, Archaea

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8162..8713
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) RepID=G3AML2_SPAPN
hypothetical protein Tax=AR4
hypothetical protein
seg (db=Seg db_id=seg from=82 to=93)
gwa2_scaffold_503_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8795..9505)
DNA (711bp) protein (237aa)
Glutamine amidotransferase class-I n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M8H0_9EURY
glutamine amidotransferase Tax=AR4
glutamine amidotransferase class-I
(db=HMMPfam db_id=PF00117 from=42 to=188 evalue=1.1e-18 interpro_id=IPR017926 interpro_description=Glutamine amidotransferase type 1)
gwa2_scaffold_503_10
AR4, Woesearchaeaota, DPANN, Archaea

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10413..11780
DNA (1368bp) protein (456aa)
glmM; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] Tax=AR4
Phosphomannomutase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0V7_THERP
glmM; phosphomannomutase
seg (db=Seg db_id=seg from=228 to=240)
gwa2_scaffold_503_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

11808..12419
DNA (612bp) protein (204aa)
Tax=AR4
gwa2_scaffold_503_12
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12484..14184)
DNA (1701bp) protein (567aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8H9_METB6
amylo-alpha-1,6-glucosidase Tax=AR4
amylo-alpha-1,6-glucosidase
GLYCOGEN DEBRANCHING ENZYME (db=HMMPanther db_id=PTHR10569 from=421 to=563 evalue=0.00022 interpro_id=IPR010401 interpro_description=Amylo-alpha-1,6-glucosidase GO=Molecular Function: amylo-alpha-1,6-glucosidase activity (GO:0004135), Biological Process: glycogen biosynthetic process (GO:0005978))
gwa2_scaffold_503_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14181..15947)
DNA (1767bp) protein (589aa)
glycogen (starch) synthase; K00693 glycogen(starch) synthase [EC:2.4.1.11] Tax=AR4
Glycogen synthase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ESU6_EMTOG
glycogen synthase
(db=HMMPfam db_id=PF05693 from=7 to=588 evalue=7.7e-137 interpro_id=IPR008631 interpro_description=Glycogen synthase GO=Molecular Function: glycogen (starch) synthase activity (GO:0004373), Biological Process: glycogen biosynthetic process (GO:0005978))
gwa2_scaffold_503_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15947..16297)
DNA (351bp) protein (117aa)
Tax=AR4
gwa2_scaffold_503_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16355..17083)
DNA (729bp) protein (243aa)
UDP pyrophosphate synthetase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=AR4
UDP pyrophosphate synthetase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A4L9_THESM
UPP_SYNTHASE (db=PatternScan db_id=PS01066 from=187 to=204 evalue=0.0 interpro_id=IPR018520 interpro_description=Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
gwa2_scaffold_503_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

17150..18409
DNA (1260bp) protein (420aa)
Glycosyl transferase group 1 n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VWU1_DESAO
group 1 glycosyl transferase Tax=AR4
hypothetical protein
(db=HMMPfam db_id=PF00534 from=234 to=390 evalue=1.4e-35 interpro_id=IPR001296 interpro_description=Glycosyl transferase, family 1 GO=Biological Process: biosynthetic process (GO:0009058))
gwa2_scaffold_503_17

Not on your lists

18403..19578
DNA (1176bp) protein (392aa)
Alpha-amylase {ECO:0000313|EMBL:KHO46692.1}; EC=3.2.1.1 {ECO:0000313|EMBL:KHO46692.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Alpha-amylase n=2 Tax=Lawsonia intracellularis RepID=Q1MRI9_LAWIP
amyA; alpha-amylase
(db=HMMPfam db_id=PF03065 from=7 to=318 evalue=3.6e-63 interpro_id=IPR004300 interpro_description=Glycoside hydrolase, family 57, N-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
extracellular Cindy Castelle (11/2/13)
gwa2_scaffold_503_18
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19639..21906)
DNA (2268bp) protein (756aa)
coiled-coil Tax=AR4
coiled-coil (db=Coil db_id=coil from=356 to=377 evalue=NA)
seg (db=Seg db_id=seg from=248 to=259)
gwa2_scaffold_503_19
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21973..22911)
DNA (939bp) protein (313aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=AR4
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CGT3_KOSOT
coiled-coil (db=Coil db_id=coil from=113 to=134 evalue=NA)
gwa2_scaffold_503_20
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

23116..23430
DNA (315bp) protein (105aa)
hypothetical protein
Tax=AR4
gwa2_scaffold_503_21
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

23411..23737
DNA (327bp) protein (109aa)
"Winged helix" DNA-binding domain Tax=AR4
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=39 to=102 evalue=7.5e-07)
gwa2_scaffold_503_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23783..24385)
DNA (603bp) protein (201aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=76 to=89)
gwa2_scaffold_503_23

Not on your lists

comp(24396..25415)
DNA (1020bp) protein (340aa)
Cell division protein FtsZ n=2 Tax=Candidatus Parvarchaeum RepID=D6GVI7_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Cell division protein FtsZ
FTSZ_2 (db=PatternScan db_id=PS01135 from=93 to=114 evalue=0.0 interpro_id=IPR020805 interpro_description=Cell division protein FtsZ, conserved site GO=Molecular Function: GTP binding (GO:0005525), Cellular Component: cytoplasm (GO:0005737))
gwa2_scaffold_503_24
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25585..26166)
DNA (582bp) protein (194aa)
Tax=AR4
gwa2_scaffold_503_25
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

26370..27500
DNA (1131bp) protein (377aa)
transmembrane_regions Tax=AR4
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=12 to=23)
gwa2_scaffold_503_26
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(27489..27935)
DNA (447bp) protein (149aa)
Putative MgtC family protein n=1 Tax=uncultured archaeon RepID=I3RKH9_9ARCH
putative Mg transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=AR4
putative membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwa2_scaffold_503_27
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(28201..29316)
DNA (1116bp) protein (372aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=65 to=78)
gwa2_scaffold_503_28
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(29616..29897)
DNA (282bp) protein (94aa)
Nucleoid protein Alba n=1 Tax=nanoarchaeote Nst1 RepID=R1G975_9ARCH
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein Tax=AR4
DNA/RNA-binding protein Alba
no description (db=Gene3D db_id=G3DSA:3.30.110.20 from=2 to=92 evalue=1.4e-24)
gwa2_scaffold_503_29
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(29915..30103)
DNA (189bp) protein (63aa)
30S ribosomal protein S17e n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3DYX3_METRM
ribosomal protein S17e Rps17e; K02962 small subunit ribosomal protein S17e Tax=AR4
ribosomal protein S17e Rps17e
RIBOSOMAL_S17E (db=PatternScan db_id=PS00712 from=41 to=56 evalue=0.0 interpro_id=IPR018273 interpro_description=Ribosomal protein S17e, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_503_30
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

30313..30576
DNA (264bp) protein (88aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=4 to=15)
Displaying items 1-30 of 51 in total

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