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AB_3033_bin_53_scaffold_56

Search features with annotation key words

Displaying items 31-60 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_53_scaffold_56_31
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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32382..32813
DNA (432bp) protein (144aa)
ribosomal protein L24p/L26e, archaeal id=18314410 bin=Nanosalina tax=Nanosalina
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rpl26e; 50S ribosomal protein L26E
AB_3033_bin_53_scaffold_56_32
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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32815..33297
DNA (483bp) protein (161aa)
50S ribosomal protein L11 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB4_METFV
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_3033_bin_53_scaffold_56_33
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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33299..33919
DNA (621bp) protein (207aa)
50S ribosomal protein L1 n=5 Tax=Methanobrevibacter RepID=RL1_METS3
rpl1P; 50S ribosomal protein L1P
Tax=RBG_13_Bathyarchaeota_46_16b_curated
AB_3033_bin_53_scaffold_56_34
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

33921..34778
DNA (858bp) protein (286aa)
Acidic ribosomal protein P0 homolog id=4367360 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
acidic ribosomal protein P0-like protein
Tax=AR5
AB_3033_bin_53_scaffold_56_35
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(34782..35915)
DNA (1134bp) protein (378aa)
thrC-2; L-threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
Threonine synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I795_METCZ
AB_3033_bin_53_scaffold_56_36
unknown

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comp(35922..36386)
DNA (465bp) protein (155aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_37
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(36391..37689)
DNA (1299bp) protein (433aa)
4-aminobutyrate aminotransferase (EC:2.6.1.-)
Acetylornithine aminotransferase id=4573784 bin=GWC2_Deltaproteobacteria_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=GWC2_Deltaproteobacteria_55_46b_curated
AB_3033_bin_53_scaffold_56_38
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(37691..39169)
DNA (1479bp) protein (493aa)
aldH; aldehyde dehydrogenase NAD+ (EC:1.2.1.3)
Aldehyde dehydrogenase id=1250029 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=CG_Aenigma_01
AB_3033_bin_53_scaffold_56_39
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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39232..40137
DNA (906bp) protein (302aa)
Carbamate kinase n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BEU0_PETMO
carbamate kinase-like carbamoyl phosphate synthetase
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Petrotoga.;" source="Petrotoga mobilis (strain DSM 10674 / SJ95).;"
AB_3033_bin_53_scaffold_56_40
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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40142..41032
DNA (891bp) protein (297aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
Ornithine carbamoyltransferase, catabolic n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGN4_ARCPA
AB_3033_bin_53_scaffold_56_41
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(41102..42892)
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003799918
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
AB_3033_bin_53_scaffold_56_42
unknown

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comp(42948..43463)
DNA (516bp) protein (172aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_43
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(43533..44366)
DNA (834bp) protein (278aa)
Endonuclease IV n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HJ33_THES4
endonuclease IV
Endonuclease IV {ECO:0000313|EMBL:AEK72962.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGMCC 1.5172 / 4557).;"
AB_3033_bin_53_scaffold_56_44

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comp(44359..44832)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036A71E7
Uncharacterized protein {ECO:0000313|EMBL:KKQ96971.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
FeS cluster assembly scaffold protein NifU
AB_3033_bin_53_scaffold_56_45
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(44852..46006)
DNA (1155bp) protein (385aa)
cysteine desulfurase (EC:2.8.1.7)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F7E31
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_53_scaffold_56_46
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

46143..46460
DNA (318bp) protein (106aa)
# 27952 # 28278 # 1 # ;gc_cont=0.419 id=18314227 bin=Nanosalina tax=Nanosalina
Putative transcriptional regulator {ECO:0000313|EMBL:EGQ44005.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_3033_bin_53_scaffold_56_47
R_RIF_OD1_04_46_16, RIF-OD1-4, Parcubacteria, Bacteria

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comp(46466..47413)
DNA (948bp) protein (316aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_04_46_16_curated
AB_3033_bin_53_scaffold_56_48
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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47519..48157
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002E36854
acetyl-CoA synthetase subunit beta
Tax=RBG_16_Deltaproteobacteria_49_23_curated
AB_3033_bin_53_scaffold_56_49
R_OD1_Nomurabacteria_42_16, Nomurabacteria, Parcubacteria, Bacteria

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comp(48739..49881)
DNA (1143bp) protein (381aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=uncultured bacterium RepID=K1YJB3_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_42_16_curated
AB_3033_bin_53_scaffold_56_50
CG_CPArch01-01, CG_CPArch01, Archaea

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50118..51212
DNA (1095bp) protein (365aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBZ7_ACIB4
UDP-N-acetylglucosamine 2-epimerase
Tax=CG_CPArch01-01
AB_3033_bin_53_scaffold_56_51
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

51286..51936
DNA (651bp) protein (217aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis id=5043022 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
nucleotidyl transferase
Tax=AR5
AB_3033_bin_53_scaffold_56_52
CG_CPArch01-01, CG_CPArch01, Archaea

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51988..53067
DNA (1080bp) protein (360aa)
Glycosyl transferases group 1 family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D1K0_CLOSO
mannosyltransferase
Tax=CG_CPArch01-01
AB_3033_bin_53_scaffold_56_53
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

53064..53954
DNA (891bp) protein (297aa)
Glycosyltransferase, putative n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZF9_PYRAB
sugar transferase related protein
Glycosyltransferase, putative {ECO:0000313|EMBL:CAB50100.1}; Sugar transferase related protein {ECO:0000313|EMBL:CCE70620.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 / Orsay).;"
AB_3033_bin_53_scaffold_56_54
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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53956..54909
DNA (954bp) protein (318aa)
Glycosyl transferase group 1 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAX0_METIK
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEF97057.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
AB_3033_bin_53_scaffold_56_55
GWA2_OD1_37_10, Parcubacteria, Bacteria

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55043..55300
DNA (258bp) protein (86aa)
Putative uncharacterized protein id=1917899 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides sp. 2_1_56FAA genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKQ23822.1}; TaxID=1618810 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_37_10.;"
AB_3033_bin_53_scaffold_56_56
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

55297..56091
DNA (795bp) protein (265aa)
Methyltransferase, FkbM family id=4224481 bin=GWF2_OP9_related_35_9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
methyltransferase FkbM family
Tax=CG_Pacearch_01
AB_3033_bin_53_scaffold_56_57
unknown

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56218..56616
DNA (399bp) protein (133aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_58
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

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57024..57257
DNA (234bp) protein (78aa)
Glycosyl transferase group 1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C650_SPHTD
group 1 glycosyl transferase
Tax=Altiarchaeum hamiconexum
AB_3033_bin_53_scaffold_56_59
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(57300..58775)
DNA (1476bp) protein (492aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW92_METFV
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADP77857.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_3033_bin_53_scaffold_56_60
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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59001..59753
DNA (753bp) protein (251aa)
Sulfotransferase n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CGB1_ACAM1
sulfotransferase
Tax=RBG_16_KB1_OP1_55_9_curated
Displaying items 31-60 of 120 in total

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