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AB_3033_bin_53_scaffold_56

Search features with annotation key words

Displaying items 91-120 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_53_scaffold_56_91

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comp(94929..95132)
DNA (204bp) protein (68aa)
Marine sediment metagenome DNA, contig: S03H2_S03879 {ECO:0000313|EMBL:GAH48259.1}; Marine sediment metagenome DNA, contig: S12H4_S06254 {ECO:0000313|EMBL:GAI94025.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=1806368 bin=GWE2_Gammaproteobacteria_37_16 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
hypothetical protein
AB_3033_bin_53_scaffold_56_92
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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95697..96248
DNA (552bp) protein (184aa)
CBS domain-containing protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0ADE1_9EURY
CBS domain-containing protein {ECO:0000313|EMBL:EHK01164.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
signal transduction protein with cbs domains
AB_3033_bin_53_scaffold_56_93
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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96288..96746
DNA (459bp) protein (153aa)
# 1158 # 2195 # 1 # ;gc_cont=0.425 id=18312805 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK01165.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
AB_3033_bin_53_scaffold_56_94
unknown

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96806..97318
DNA (513bp) protein (171aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_95
unknown

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97343..97867
DNA (525bp) protein (175aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_96
RHI_TM6_32_22, TM6, Bacteria

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97963..98310
DNA (348bp) protein (116aa)
Tax=RIFCSPHIGHO2_12_FULL_TM6_32_22_curated
AB_3033_bin_53_scaffold_56_97
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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98319..99464
DNA (1146bp) protein (382aa)
UPF0095 protein Ferp_0245 id=2637003 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_3033_bin_53_scaffold_56_98
AR20, Woesearchaeaota, DPANN, Archaea

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99510..100229
DNA (720bp) protein (240aa)
hypothetical protein
id=5103166 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
AB_3033_bin_53_scaffold_56_99

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comp(100284..100646)
DNA (363bp) protein (121aa)
Nucleic acid-binding, OB-fold-like id=5043021 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO47521.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
AB_3033_bin_53_scaffold_56_100
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(100648..101175)
DNA (528bp) protein (176aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037643D1
2'-5' RNA ligase
AB_3033_bin_53_scaffold_56_101
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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101240..102325
DNA (1086bp) protein (362aa)
id=2636966 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Type II secretory pathway, component ExeA (predicted ATPase)
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_53_scaffold_56_102
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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102397..102666
DNA (270bp) protein (90aa)
Putative uncharacterized protein id=2636957 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PRC-barrel protein
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_53_scaffold_56_103
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(102659..103606)
DNA (948bp) protein (316aa)
DNA repair and recombination protein RadA n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QDC6_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
radA; DNA repair and recombination protein RadA
AB_3033_bin_53_scaffold_56_104
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(103608..104585)
DNA (978bp) protein (326aa)
Replication factor-A domain-containing protein; K07466 replication factor A1 id=18314342 bin=Nanosalina tax=Nanosalina
Nucleic acid binding OB-fold tRNA/helicase-type
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_53_scaffold_56_105
CG_Pacearch_03, Pacearchaeota, Archaea

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104724..105014
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=2636718 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=CG_Pacearch_03
AB_3033_bin_53_scaffold_56_106
unknown

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105581..105931
DNA (351bp) protein (117aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_107
unknown

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106022..106996
DNA (975bp) protein (325aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_108
CG_Micra_04, Micraarchaeota, Archaea

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107002..107673
DNA (672bp) protein (224aa)
KaiC domain protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH75_PYRYC
KaiC domain-containing protein
Tax=CG_Micra_04
AB_3033_bin_53_scaffold_56_109

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comp(107680..108081)
DNA (402bp) protein (134aa)
Histidine triad (HIT) protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P8Q4_METFA
Uncharacterized protein {ECO:0000313|EMBL:KHO48706.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
histidine triad (HIT) protein
AB_3033_bin_53_scaffold_56_110
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(108136..108333)
DNA (198bp) protein (66aa)
Transcription factor CBF/NF-Y histone n=2 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAQ7_9EURY
Transcription factor CBF/NF-Y histone {ECO:0000313|EMBL:EHK02133.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
archaeal histone A
AB_3033_bin_53_scaffold_56_111
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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108598..110991
DNA (2394bp) protein (798aa)
polI; DNA polymerase I; K02319 DNA polymerase I [EC:2.7.7.7] id=18315336 bin=Nanosalinarum tax=Nanosalinarum
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
DNA polymerase Pol2
AB_3033_bin_53_scaffold_56_112
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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110994..111878
DNA (885bp) protein (295aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01975}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
Methionine aminopeptidase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZNU7_THELI
AB_3033_bin_53_scaffold_56_113
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(111881..114151)
DNA (2271bp) protein (757aa)
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase id=18314375 bin=Nanosalina species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalina
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:EGQ43838.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
Cell division cycle protein 48 homolog MJ1156
AB_3033_bin_53_scaffold_56_114
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(114154..114477)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0ABF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK01881.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
AB_3033_bin_53_scaffold_56_115
nanoarchaeote Nst1, Nanoarchaeota, Archaea

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114573..115277
DNA (705bp) protein (235aa)
DNA repair and recombination protein RadB n=1 Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1294122 species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
DNA repair and recombination protein RadB
AB_3033_bin_53_scaffold_56_116
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(115269..117299)
DNA (2031bp) protein (677aa)
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] id=18314380 bin=Nanosalina tax=Nanosalina
DNA topoisomerase 1
Tax=CG_Aenigma_01
AB_3033_bin_53_scaffold_56_117
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(117460..118740)
DNA (1281bp) protein (427aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase id=4935172 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_3033_bin_53_scaffold_56_118
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(118733..119758)
DNA (1026bp) protein (342aa)
PREDICTED: tyrosine--tRNA ligase, cytoplasmic n=1 Tax=Microtus ochrogaster RepID=UPI00038BD0ED
tyrosyl-tRNA synthetase
Tax=CG_Pacearch_05
AB_3033_bin_53_scaffold_56_119
GWA1_OP11_40_16_partial, Curtissbacteria, Microgenomates, Bacteria

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comp(119759..120220)
DNA (462bp) protein (154aa)
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:KKR51113.1}; TaxID=1618405 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWA1_40_16.;"
AB_3033_bin_53_scaffold_56_trna_1
unknown

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comp(120240..120311)
DNA (72bp)
transferRNA Tyr
Displaying items 91-120 of 120 in total

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