ggKbase home page

AB_3033_bin_53_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_53_scaffold_56_1
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


2..1078
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00035F76D5
aspartyl-tRNA synthetase
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_53_scaffold_56_2
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

1126..3669
DNA (2544bp) protein (848aa)
SMC structural maintenance of chromosomes family protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QDR5_9EURY
SMC structural maintenance of chromosomes family protein {ECO:0000313|EMBL:EGQ40413.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
Chromosome partition protein Smc
AB_3033_bin_53_scaffold_56_3

Not on your lists

3718..4482
DNA (765bp) protein (255aa)
ScpA/B protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QDS1_9EURY
Marine sediment metagenome DNA, contig: S01H1_S26570 {ECO:0000313|EMBL:GAG31221.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scpA; chromosome segregation and condensation protein ScpA
AB_3033_bin_53_scaffold_56_4
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

4475..4972
DNA (498bp) protein (166aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B id=18314534 bin=Nanosalina tax=Nanosalina
Segregation and condensation protein B {ECO:0000313|EMBL:EGQ42700.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
condensin subunit ScpB
AB_3033_bin_53_scaffold_56_5
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

5018..6988
DNA (1971bp) protein (657aa)
Fibronectin-binding A domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYX7_METFV
fibronectin-binding a domain-containing protein
Fibronectin-binding A domain protein {ECO:0000313|EMBL:ADP77509.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_3033_bin_53_scaffold_56_6
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

7140..9404
DNA (2265bp) protein (755aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5042166 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
dynein regulation protein LC7
Tax=CG_Aenigma_01
AB_3033_bin_53_scaffold_56_7
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(9367..10125)
DNA (759bp) protein (253aa)
Cell division ATPase MinD, archaeal n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QDV3_9EURY
Cell division ATPase MinD, archaeal {ECO:0000313|EMBL:EGQ40451.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
iron-sulfur cluster carrier protein
AB_3033_bin_53_scaffold_56_8
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

10216..10761
DNA (546bp) protein (182aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=18315480 bin=Nanosalinarum tax=Nanosalinarum
tRNA intron endonuclease {ECO:0000313|EMBL:EGQ40775.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
tRNA-splicing endonuclease subunit alpha
AB_3033_bin_53_scaffold_56_9
unknown

Not on your lists

10907..11638
DNA (732bp) protein (244aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_10
unknown

Not on your lists

11629..12270
DNA (642bp) protein (214aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_11
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

12272..12769
DNA (498bp) protein (166aa)
Uncharacterized protein (Fragment) n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QD33_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EGQ40181.1}; Flags: Fragment;; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
AB_3033_bin_53_scaffold_56_12
unknown

Not on your lists

12766..13332
DNA (567bp) protein (189aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_13
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13329..14153)
DNA (825bp) protein (275aa)
Rhomboid family protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMA2_METZD
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AEH60994.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
AB_3033_bin_53_scaffold_56_14

Not on your lists


comp(14166..15659)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B52A0
Uncharacterized protein {ECO:0000313|EMBL:KKN43534.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_3033_bin_53_scaffold_56_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16283..17398
DNA (1116bp) protein (372aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUZ5_9EURY
tryptophanyl-tRNA synthetase
Tax=RBG_13_Pacearchaeota_33_26_curated
AB_3033_bin_53_scaffold_56_16
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17395..17985)
DNA (591bp) protein (197aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XB79_THEPJ
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ADG81399.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
AB_3033_bin_53_scaffold_56_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


18154..19653
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CA4E5
Phenylalanine-tRNA ligase alpha subunit
Tax=CG_Aenigma_01
AB_3033_bin_53_scaffold_56_18
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


19641..21314
DNA (1674bp) protein (558aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPR9_THELI id=5103639 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase beta subunit
Tax=CG_Aenigma_01
AB_3033_bin_53_scaffold_56_19
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(21311..22078)
DNA (768bp) protein (256aa)
chromosome partitioning ATPase; K03609 septum site-determining protein MinD id=18314416 bin=Nanosalina tax=Nanosalina
Cell division ATPase MinD, archaeal {ECO:0000313|EMBL:EGQ40452.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
chromosome partitioning ATPase
AB_3033_bin_53_scaffold_56_20
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

22336..23022
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00035CBF3B
hypothetical protein
Tax=CG_Micra_05
AB_3033_bin_53_scaffold_56_21
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

23019..23771
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A9EC5
hypothetical protein
Tax=CG_Micra_05
AB_3033_bin_53_scaffold_56_22
unknown

Not on your lists

comp(23866..24156)
DNA (291bp) protein (97aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_23
unknown

Not on your lists

comp(24439..24729)
DNA (291bp) protein (97aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_24
unknown

Not on your lists

comp(24736..25641)
DNA (906bp) protein (302aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_25

Not on your lists


25837..28461
DNA (2625bp) protein (875aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5049673 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Leucine-tRNA ligase
AB_3033_bin_53_scaffold_56_26
unknown

Not on your lists

comp(28462..28731)
DNA (270bp) protein (90aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_27
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

28786..29427
DNA (642bp) protein (214aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJW4_THEBM
peptidyl-prolyl cis-trans isomerase
Tax=CG_Aenigma_01
AB_3033_bin_53_scaffold_56_28
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

29477..30604
DNA (1128bp) protein (376aa)
Cell division protein FtsZ n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFD7_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
Cell division protein FtsZ
AB_3033_bin_53_scaffold_56_29
unknown

Not on your lists

comp(30670..32013)
DNA (1344bp) protein (448aa)

This feature has no annotations

AB_3033_bin_53_scaffold_56_30
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

32201..32371
DNA (171bp) protein (57aa)
UPI0003D1AB49 related cluster n=1 Tax=unknown RepID=UPI0003D1AB49
secE; preprotein translocase subunit SecE
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 120 in total

View Taxonomy