ggKbase home page

Meg19_1012_Bin_199

DPANN_genomes_binning_Archaea_47_0
In projects: DPANN_genomes_binning  |  DPANN  |  archaea_ggkbase

Consensus taxonomy: Archaea

Displaying items 1-50 of 107 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Meg19_1012_Bin_199_scaffold_7279
Domain: Archaea (52.17%)
46 27856 bp 46.94 0.01 95.39
Meg19_1012_Bin_199_scaffold_1477
Domain: Archaea (58.33%)
36 40068 bp 47.07 0.00 94.71
Meg19_1012_Bin_199_scaffold_2420
Domain: Archaea (66.67%)
33 32202 bp 47.21 0.00 93.18
Meg19_1012_Bin_199_scaffold_3763 30 25817 bp 47.17 0.01 93.62
Meg19_1012_Bin_199_scaffold_4537
Domain: Archaea (67.86%)
28 23602 bp 46.06 0.01 95.20
Meg19_1012_Bin_199_scaffold_6815 26 19363 bp 48.21 0.01 95.75
Meg19_1012_Bin_199_scaffold_21790
Domain: Archaea (54.17%)
24 15147 bp 44.77 0.01 96.40
Meg19_1012_Bin_199_scaffold_10839 23 22508 bp 47.57 0.01 93.74
Meg19_1012_Bin_199_scaffold_7053
Domain: Archaea (68.18%)
22 19007 bp 46.76 0.01 92.00
Meg19_1012_Bin_199_scaffold_10934
Domain: Archaea (80.95%)
21 15251 bp 45.33 0.01 95.62
Meg19_1012_Bin_199_scaffold_15529 20 12702 bp 43.91 0.01 90.16
Meg19_1012_Bin_199_scaffold_36078
Domain: Archaea (65%)
20 14327 bp 45.20 0.01 95.55
Meg19_1012_Bin_199_scaffold_41478
Domain: Archaea (90%)
20 9329 bp 46.46 0.02 98.05
Meg19_1012_Bin_199_scaffold_20993
Domain: Archaea (63.16%)
19 14895 bp 46.23 0.01 89.24
Meg19_1012_Bin_199_scaffold_22137
Domain: Archaea (52.63%)
19 19324 bp 47.10 0.01 94.50
Meg19_1012_Bin_199_scaffold_28926
Domain: Archaea (83.33%)
18 8988 bp 45.57 0.02 96.94
Meg19_1012_Bin_199_scaffold_114870
Domain: Archaea (61.11%)
18 10555 bp 47.35 0.01 92.53
Meg19_1012_Bin_199_scaffold_13941
Domain: Archaea (70.59%)
17 13454 bp 42.73 0.01 92.47
Meg19_1012_Bin_199_scaffold_104263 17 7873 bp 43.72 0.02 73.77
Meg19_1012_Bin_199_scaffold_16758 16 12190 bp 46.77 0.01 95.66
Meg19_1012_Bin_199_scaffold_20691
Domain: Archaea (62.5%)
16 10864 bp 47.17 0.01 92.65
Meg19_1012_Bin_199_scaffold_10846 15 15313 bp 46.69 0.01 97.86
Meg19_1012_Bin_199_scaffold_13043
Species: archaeon GW2011_AR10 (53.33%)
15 13925 bp 46.26 0.01 97.10
Meg19_1012_Bin_199_scaffold_19601
Domain: Archaea (60%)
15 11178 bp 47.20 0.01 94.50
Meg19_1012_Bin_199_scaffold_11649
Domain: Bacteria (50%)
14 14751 bp 45.56 0.01 93.96
Meg19_1012_Bin_199_scaffold_12698
Species: AR10 (50%)
14 14115 bp 46.29 0.01 92.71
Meg19_1012_Bin_199_scaffold_13665
Domain: Archaea (78.57%)
14 13581 bp 46.78 0.01 89.11
Meg19_1012_Bin_199_scaffold_23486 14 10113 bp 47.59 0.01 98.46
Meg19_1012_Bin_199_scaffold_16044 13 12482 bp 46.36 0.01 95.83
Meg19_1012_Bin_199_scaffold_18854 13 11430 bp 44.74 0.01 94.25
Meg19_1012_Bin_199_scaffold_22364 13 10387 bp 44.90 0.01 95.41
Meg19_1012_Bin_199_scaffold_25204
Domain: Archaea (53.85%)
13 9732 bp 48.00 0.02 96.73
Meg19_1012_Bin_199_scaffold_28699
Domain: Archaea (69.23%)
13 9027 bp 47.03 0.02 98.11
Meg19_1012_Bin_199_scaffold_42825 13 7158 bp 46.72 0.02 83.74
Meg19_1012_Bin_199_scaffold_14671
Domain: Archaea (66.67%)
12 13102 bp 48.03 0.01 89.09
Meg19_1012_Bin_199_scaffold_22632
Domain: Bacteria (66.67%)
12 10318 bp 44.84 0.01 95.98
Meg19_1012_Bin_199_scaffold_27133
Domain: Archaea (58.33%)
12 9335 bp 45.70 0.02 95.13
Meg19_1012_Bin_199_scaffold_27430 12 9271 bp 45.14 0.02 85.91
Meg19_1012_Bin_199_scaffold_28703
Domain: Archaea (66.67%)
12 9027 bp 47.68 0.02 95.02
Meg19_1012_Bin_199_scaffold_29513 12 8881 bp 46.05 0.02 91.24
Meg19_1012_Bin_199_scaffold_38850
Domain: Archaea (75%)
12 7570 bp 46.01 0.02 94.80
Meg19_1012_Bin_199_scaffold_44659
Domain: Archaea (91.67%)
12 6978 bp 48.32 0.02 89.71
Meg19_1012_Bin_199_scaffold_22991
Domain: Archaea (90.91%)
11 10236 bp 48.71 0.01 95.81
Meg19_1012_Bin_199_scaffold_2696
Species: AR10 (60%)
10 31849 bp 49.51 0.00 98.30
Meg19_1012_Bin_199_scaffold_22931
Domain: Bacteria (60%)
10 10250 bp 48.03 0.01 93.95
Meg19_1012_Bin_199_scaffold_30515 10 8710 bp 47.36 0.02 91.58
Meg19_1012_Bin_199_scaffold_35943
Domain: Archaea (60%)
10 7920 bp 47.22 0.02 97.05
Meg19_1012_Bin_199_scaffold_84448
Species: AR10 (50%)
10 8027 bp 47.09 0.02 90.67
Meg19_1012_Bin_199_scaffold_30370
Domain: Archaea (55.56%)
9 8735 bp 47.20 0.02 96.82
Meg19_1012_Bin_199_scaffold_32831
Domain: Archaea (55.56%)
9 8339 bp 47.86 0.02 96.88
Displaying items 1-50 of 107 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.