ggKbase home page

Meg19_1012_Bin_199_scaffold_4537

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_199_scaffold_4537_1
unknown

Not on your lists

comp(1..168)
DNA (168bp) protein (56aa)

This feature has no annotations

Meg19_1012_Bin_199_scaffold_4537_2
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(215..1552)
DNA (1338bp) protein (446aa)
NHL repeat containing protein id=5802062 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg19_1012_Bin_199_scaffold_4537_3

Not on your lists

comp(1587..3779)
DNA (2193bp) protein (731aa)
fusA; elongation factor 2
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5241342 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_199_scaffold_4537_4

Not on your lists


comp(3790..4392)
DNA (603bp) protein (201aa)
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 id=5241341 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:AJF60332.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_199_scaffold_4537_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(4398..4826)
DNA (429bp) protein (143aa)
30S ribosomal protein S12, small subunit ribosomal protein S12
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5241340 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_4537_6

Not on your lists

comp(4832..5245)
DNA (414bp) protein (138aa)
N utilization substance protein A {ECO:0000313|EMBL:KHO55781.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
nusA; N utilization substance protein A
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5241339 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_4537_7

Not on your lists


comp(5253..5558)
DNA (306bp) protein (102aa)
50S ribosomal protein L30, large subunit ribosomal protein L30e {ECO:0000313|EMBL:KHO55780.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e id=5241338 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_4537_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(5570..6805)
DNA (1236bp) protein (412aa)
rpoA2; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5241337 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_4537_9

Not on your lists

comp(6811..9435)
DNA (2625bp) protein (875aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5241336 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
Meg19_1012_Bin_199_scaffold_4537_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(9444..11267)
DNA (1824bp) protein (608aa)
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5241335 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_4537_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(11276..12742)
DNA (1467bp) protein (489aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5241333 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_4537_12
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(12759..12989)
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
DNA-directed RNA polymerase subunit H n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S663_METSF
RNA polymerase Rpb5
Meg19_1012_Bin_199_scaffold_4537_13
Anguilla anguilla, Anguilla, Anguilliformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(13176..13757)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Ciona intestinalis RepID=F6QWU8_CIOIN
Uncharacterized protein {ECO:0000313|EMBL:JAH95026.1}; TaxID=7936 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla.;" source="Anguilla anguilla (European freshwater eel) (Muraena anguilla).;"
metal dependent phosphohydrolase with HD domain
Meg19_1012_Bin_199_scaffold_4537_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13822..14892
DNA (1071bp) protein (357aa)
MscS family membrane protein YnaI
mechanosensitive ion channel protein MscS; K16052 MscS family membrane protein YnaI id=5241331 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_4537_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14948..16003
DNA (1056bp) protein (352aa)
Putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPS) n=1 Tax=uncultured archaeon RepID=D1JFP7_9ARCH
Polyprenyl synthetase
Tax=CG_Woesearch_02
Meg19_1012_Bin_199_scaffold_4537_trna_1
unknown

Not on your lists

comp(16020..16091)
DNA (72bp)
transferRNA Asp
Meg19_1012_Bin_199_scaffold_4537_16
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16210..18369)
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003701CF4
acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Meg19_1012_Bin_199_scaffold_4537_17
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18444..18722)
DNA (279bp) protein (93aa)
Ferredoxin thioredoxin reductase beta chain n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RIH9_METP4
ferredoxin thioredoxin reductase beta chain
Ferredoxin thioredoxin reductase beta chain {ECO:0000313|EMBL:ADN35492.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
Meg19_1012_Bin_199_scaffold_4537_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18732..19055)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KD40_CHLTE
thioredoxin
Tax=CG_Woesearch_02
Meg19_1012_Bin_199_scaffold_4537_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(19117..19857)
DNA (741bp) protein (247aa)
zinc/iron permease id=15189255 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
putative divalent heavy-metal cations transporter
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Meg19_1012_Bin_199_scaffold_4537_20
unknown

Not on your lists

comp(19896..20321)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037D8167
Meg19_1012_Bin_199_scaffold_4537_21
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

20385..21209
DNA (825bp) protein (275aa)
aldo/keto reductase id=5044014 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
aldo/keto reductase
Tax=AR4
Meg19_1012_Bin_199_scaffold_4537_22
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21213..21764
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034AC4C1
Uncharacterized protein {ECO:0000313|EMBL:EAQ07610.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
type 11 methyltransferase
Meg19_1012_Bin_199_scaffold_4537_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(21844..21972)
DNA (129bp) protein (43aa)
hypothetical protein
id=5241663 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_4537_24

Not on your lists

comp(21978..22346)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54877.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
Putative uncharacterized protein id=5241664 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_4537_25
unknown

Not on your lists

comp(22516..22647)
DNA (132bp) protein (44aa)

This feature has no annotations

Meg19_1012_Bin_199_scaffold_4537_26

Not on your lists

comp(22674..23345)
DNA (672bp) protein (224aa)
Phosphohydrolase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVG9_9ARCH
Marine sediment metagenome DNA, contig: S03H2_S11244 {ECO:0000313|EMBL:GAH75840.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg19_1012_Bin_199_scaffold_4537_27
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(23356..23601)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis X1 RepID=G0H2I4_METMI
hypothetical protein
Methanococcus maripaludis strain S2, complete sequence {ECO:0000313|EMBL:CAF30994.1}; Flags: Precursor;; TaxID=267377 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis (strain S2 / LL).;"
Displaying 28 items

View Taxonomy