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Meg19_1012_Bin_199_scaffold_41478

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_199_scaffold_41478_1
unknown

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2..274
DNA (273bp) protein (91aa)
rpl3p; 50S ribosomal protein L3P
Meg19_1012_Bin_199_scaffold_41478_2
AR10, Diapherotrites, DPANN, Archaea

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271..1074
DNA (804bp) protein (268aa)
large subunit ribosomal protein L4e
LSU ribosomal protein l4p; K02930 large subunit ribosomal protein L4e id=5241351 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_41478_3

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1071..1343
DNA (273bp) protein (91aa)
large subunit ribosomal protein L23
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=5241352 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_199_scaffold_41478_4
AR10, Diapherotrites, DPANN, Archaea

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1344..2063
DNA (720bp) protein (240aa)
large subunit ribosomal protein L2
LSU ribosomal protein l2p; K02886 large subunit ribosomal protein L2 id=5241353 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_41478_5

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2073..2477
DNA (405bp) protein (135aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
small subunit ribosomal protein S19
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5241354 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_41478_6

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2482..2949
DNA (468bp) protein (156aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22P, large subunit ribosomal protein L22
rpl22p; 50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22 id=5241355 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_41478_7

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2946..3968
DNA (1023bp) protein (341aa)
Small subunit ribosomal protein S3 {ECO:0000313|EMBL:KHO55758.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S3
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5241356 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_41478_8
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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3979..4200
DNA (222bp) protein (74aa)
50S ribosomal protein L29P n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DUA4_METV3
50S ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
Meg19_1012_Bin_199_scaffold_41478_9
AR10, Diapherotrites, DPANN, Archaea

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4211..4513
DNA (303bp) protein (101aa)
translation initiation factor 1
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 id=5241358 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_41478_10
AR10, Diapherotrites, DPANN, Archaea

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4506..4805
DNA (300bp) protein (100aa)
ribonuclease P protein subunit POP4 (EC:3.1.26.5)
ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] id=5241359 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_41478_11

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4802..5110
DNA (309bp) protein (103aa)
30S ribosomal protein S17P n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFV5_PYRYC
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS11812.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
Meg19_1012_Bin_199_scaffold_41478_12
AR10, Diapherotrites, DPANN, Archaea

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5107..5505
DNA (399bp) protein (133aa)
50S ribosomal protein L14, large subunit ribosomal protein L14
rpl14p; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5241361 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_41478_13
AR10, Diapherotrites, DPANN, Archaea

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5516..6079
DNA (564bp) protein (188aa)
large subunit ribosomal protein L24
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5241362 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_41478_14
AR10, Diapherotrites, DPANN, Archaea

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6069..6803
DNA (735bp) protein (245aa)
small subunit ribosomal protein S4e
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e id=5241363 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_41478_15

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6796..7299
DNA (504bp) protein (168aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L5
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5241364 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_41478_16

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7448..7840
DNA (393bp) protein (131aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8, small subunit ribosomal protein S8
rps8p; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5241366 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_41478_17
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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7853..8389
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXV8_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
50S ribosomal protein L6
Meg19_1012_Bin_199_scaffold_41478_18

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8399..8884
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55770.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L32e
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5241368 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg19_1012_Bin_199_scaffold_41478_19
unknown

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8886..9032
DNA (147bp) protein (49aa)

This feature has no annotations

Meg19_1012_Bin_199_scaffold_41478_20
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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9037..9318
DNA (282bp) protein (94aa)
50S ribosomal protein L19e n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RL19E_PYRHO
rpl19e; 50S ribosomal protein L19
50S ribosomal protein L19e {ECO:0000255|HAMAP-Rule:MF_01475}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
Displaying 20 items

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