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Meg19_1012_Bin_199_scaffold_36646

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_199_scaffold_36646_1

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2..733
DNA (732bp) protein (244aa)
elongation factor 1-alpha (EC:2.7.7.4)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5241343 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_199_scaffold_36646_2

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822..1130
DNA (309bp) protein (103aa)
small subunit ribosomal protein S10
SSU ribosomal protein s10p; K02946 small subunit ribosomal protein S10 id=5241344 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg19_1012_Bin_199_scaffold_36646_3
unknown

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comp(1158..1787)
DNA (630bp) protein (210aa)

This feature has no annotations

Meg19_1012_Bin_199_scaffold_36646_4
AR10, Diapherotrites, DPANN, Archaea

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1859..2740
DNA (882bp) protein (294aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=5241765 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_36646_5

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2740..3156
DNA (417bp) protein (139aa)
Protein archease n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQT5_METIM
Uncharacterized protein {ECO:0000313|EMBL:KKM27585.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg19_1012_Bin_199_scaffold_36646_6
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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3172..4602
DNA (1431bp) protein (477aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
tRNA-splicing ligase RtcB n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4W6_METSW
hypothetical protein
Meg19_1012_Bin_199_scaffold_36646_7
AR10, Diapherotrites, DPANN, Archaea

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4684..6360
DNA (1677bp) protein (559aa)
DSBA-like protein thioredoxin protein
DSBA-like thioredoxin domain-containing protein id=5240746 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg19_1012_Bin_199_scaffold_36646_8
unknown

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6406..6609
DNA (204bp) protein (68aa)

This feature has no annotations

Meg19_1012_Bin_199_scaffold_36646_9

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6907..7830
DNA (924bp) protein (308aa)
large subunit ribosomal protein L3
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5241350 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 9 items

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