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ERMGT100_2_curated_scaffold_2

Search features with annotation key words

Displaying items 31-60 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_2_30

Not on your lists

comp(34937..38476)
-----------------
DNA (3540bp)
protein (1180aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D673_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD82114.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
multi-sensor hybrid histidine kinase
ERMGT100_2_curated_scaffold_2_31
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(38601..39869)
-----------------
DNA (1269bp)
protein (423aa)
hypothetical protein id=14627544 bin=bin7_NC10_sister species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_2_32
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(39871..40119)
-----------------
DNA (249bp)
protein (83aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_2_33
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(40116..41462)
-----------------
DNA (1347bp)
protein (449aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I6_GEMAT
protein of unknown function DUF1800
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_2_34
unknown

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comp(41546..41779)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_35
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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41918..44578
-----------------
DNA (2661bp)
protein (887aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UH4_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ86696.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_2_36
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(44575..45924)
-----------------
DNA (1350bp)
protein (450aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371EEE6
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG88649.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_2_37
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

46061..46636
-----------------
DNA (576bp)
protein (192aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JIZ8_SYNJB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_2_trna_2
unknown

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comp(46647..46718)
-----------------
DNA (72bp)
transferRNA Cys
ERMGT100_2_curated_scaffold_2_38
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

47089..47700
-----------------
DNA (612bp)
protein (204aa)
Methyltransferase type 11 n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QX81_9ACTO
methyltransferase type 11
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_2_39
unknown

Not on your lists

47728..47880
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_40
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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47890..48567
-----------------
DNA (678bp)
protein (226aa)
ArsR family transcriptional regulator id=24433487 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ArsR family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_41
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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48516..48926
-----------------
DNA (411bp)
protein (137aa)
ychN_[H]; DsrE family protein id=24433486 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ychN_[H]; DsrE family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_42
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

48941..50098
-----------------
DNA (1158bp)
protein (386aa)
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=mine drainage metagenome RepID=E6PPL8_9ZZZZ id=5225174 bin=16ft_combo_ws3_JS1 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_43
unknown

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50113..50364
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_44
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(50351..51919)
-----------------
DNA (1569bp)
protein (523aa)
Glycosyl transferase family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7G7_SPHTD
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:ACZ39813.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
ERMGT100_2_curated_scaffold_2_45
unknown

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52634..53506
-----------------
DNA (873bp)
protein (291aa)
cytolysin immunity CylI protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484401
ERMGT100_2_curated_scaffold_2_46
unknown

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comp(53503..54735)
-----------------
DNA (1233bp)
protein (411aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_47
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(54852..56291)
-----------------
DNA (1440bp)
protein (480aa)
Extracellular repeat protein, HAF family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGN5_RHOM4
HAF family extracellular repeat-containing protein
Extracellular repeat protein, HAF family {ECO:0000313|EMBL:ACY49598.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
ERMGT100_2_curated_scaffold_2_48
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(56435..60925)
-----------------
DNA (4491bp)
protein (1497aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B3E5E1
Uncharacterized protein {ECO:0000313|EMBL:AHJ96160.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
ERMGT100_2_curated_scaffold_2_49
unknown

Not on your lists

comp(60922..61608)
-----------------
DNA (687bp)
protein (229aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_50
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

Not on your lists

62020..66702
-----------------
DNA (4683bp)
protein (1561aa)
id=7201299 bin=TA06_GWE2_final species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=TA06_GWE2_final organism_group=TA06
peptidase S8 and S53
Tax=RBG_13_WOR_3_43_14_curated
ERMGT100_2_curated_scaffold_2_51
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(66757..67140)
-----------------
DNA (384bp)
protein (128aa)
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZXH8_9PROT id=5224444 bin=16ft_combo_ws3_JS1 species=SAR116 cluster alpha proteobacterium HIMB100 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_52
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(67159..67656)
-----------------
DNA (498bp)
protein (166aa)
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) id=24418767 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_53
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67661..68926)
-----------------
DNA (1266bp)
protein (422aa)
Beta-lactamase id=2085283 bin=GWB2_Bacteroidetes_32_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
beta-lactamase
Tax=GWD2_Bacteroidetes_33_33_curated
ERMGT100_2_curated_scaffold_2_54
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(69111..71948)
-----------------
DNA (2838bp)
protein (946aa)
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG90389.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=8265962 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
ERMGT100_2_curated_scaffold_2_55
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72078..73271)
-----------------
DNA (1194bp)
protein (398aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EKP94609.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EKP94609.1};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q110_9FIRM
ERMGT100_2_curated_scaffold_2_56
RLO_PLX_64_10, Bacteria

Not on your lists

comp(73481..74167)
-----------------
DNA (687bp)
protein (229aa)
Putative uncharacterized protein id=5017157 bin=GWA2_Ignavibacteria_55_11 species=Salinispora arenicola genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ERMGT100_2_curated_scaffold_2_57
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(74192..75715)
-----------------
DNA (1524bp)
protein (508aa)
glycosyl transferase family protein id=16959104 bin=RBG_16_Aminicenantes_63_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Aminicenantes_63_16_curated
ERMGT100_2_curated_scaffold_2_58
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(75732..76154)
-----------------
DNA (423bp)
protein (141aa)
id=5223968 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying items 31-60 of 156 in total

View Taxonomy