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ERMGT100_2_curated_scaffold_2

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Displaying items 151-156 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_2_149
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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196569..197000
-----------------
DNA (432bp)
protein (144aa)
Nodulation efficiency protein D id=24457738 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_150
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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197007..197882
-----------------
DNA (876bp)
protein (292aa)
putative membrane protease subunit HflC id=24457739 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative membrane protease subunit HflC
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_151
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(198096..198986)
-----------------
DNA (891bp)
protein (297aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LID2_CHLTF id=5223563 bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_152
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(199041..199604)
-----------------
DNA (564bp)
protein (188aa)
folE; GTP cyclohydrolase I id=24457741 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=uncultured Eggerthella sp. SMG5 genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
GTP cyclohydrolase I
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_trna_1
unknown

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comp(199663..199736)
-----------------
DNA (74bp)
transferRNA Gly
ERMGT100_2_curated_scaffold_2_153
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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199877..201103
-----------------
DNA (1227bp)
protein (409aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] id=24457742 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Aeromicrobium marinum genus=Aeromicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aspartate kinase (EC:2.7.2.4)
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 151-156 of 156 in total

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