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ERMGT100_2_curated_scaffold_2

Search features with annotation key words

Displaying items 61-90 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_2_59
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76151..76675)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein id=24515465 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE03233.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
ERMGT100_2_curated_scaffold_2_60
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

76969..77172
-----------------
DNA (204bp)
protein (68aa)
Cold-shock DNA-binding domain protein n=4 Tax=Anaeromyxobacter RepID=B4UM96_ANASK id=5224390 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cold-shock DNA-binding domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_61

Not on your lists

comp(77274..77873)
-----------------
DNA (600bp)
protein (200aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000370306D
Marine sediment metagenome DNA, contig: S01H1_L08340 {ECO:0000313|EMBL:GAF90444.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ERMGT100_2_curated_scaffold_2_62
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

77987..79135
-----------------
DNA (1149bp)
protein (383aa)
Putative uncharacterized protein n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KCP4_CHLTE
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
ERMGT100_2_curated_scaffold_2_63
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(79151..79915)
-----------------
DNA (765bp)
protein (255aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000377E677
Uncharacterized protein {ECO:0000313|EMBL:GAO43967.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
ERMGT100_2_curated_scaffold_2_64

Not on your lists

comp(79915..80361)
-----------------
DNA (447bp)
protein (149aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=uncultured bacterium F42-01 RepID=I3VIK3_9BACT
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:AFK79209.1}; TaxID=1191438 species="Bacteria; environmental samples.;" source="uncultured bacterium F42-01.;"
dehydratase
ERMGT100_2_curated_scaffold_2_65

Not on your lists

comp(80366..81628)
-----------------
DNA (1263bp)
protein (421aa)
Putative monooxygenase n=1 Tax=uncultured bacterium F42-01 RepID=I3VIK6_9BACT
Putative monooxygenase {ECO:0000313|EMBL:AFK79212.1}; TaxID=1191438 species="Bacteria; environmental samples.;" source="uncultured bacterium F42-01.;"
pyridine nucleotide-disulfide oxidoreductase
ERMGT100_2_curated_scaffold_2_66

Not on your lists

comp(81657..82214)
-----------------
DNA (558bp)
protein (186aa)
OsmC-like protein n=1 Tax=uncultured bacterium F42-01 RepID=I3VIK5_9BACT
OsmC-like protein {ECO:0000313|EMBL:AFK79211.1}; TaxID=1191438 species="Bacteria; environmental samples.;" source="uncultured bacterium F42-01.;"
OsmC family protein
ERMGT100_2_curated_scaffold_2_67

Not on your lists

comp(82281..83630)
-----------------
DNA (1350bp)
protein (450aa)
2-polyprenyl-6-methoxyphenol hydroxylase n=1 Tax=uncultured bacterium F42-01 RepID=I3VIK4_9BACT
2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:AFK79210.1}; TaxID=1191438 species="Bacteria; environmental samples.;" source="uncultured bacterium F42-01.;"
FAD-binding monooxygenase
ERMGT100_2_curated_scaffold_2_68
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(83722..86445)
-----------------
DNA (2724bp)
protein (908aa)
Serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ32_KORVE
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ERMGT100_2_curated_scaffold_2_69
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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86564..86836
-----------------
DNA (273bp)
protein (91aa)
GIY-YIG nuclease family protein n=2 Tax=Oscillibacter RepID=U2S572_9FIRM
GIY-YIG nuclease family protein {ECO:0000313|EMBL:ERK63647.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
yhbQ; GIY-YIG catalytic domain-containing protein
ERMGT100_2_curated_scaffold_2_70
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86893..88107
-----------------
DNA (1215bp)
protein (405aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQM5_SORC5
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:CAN90467.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
ERMGT100_2_curated_scaffold_2_71
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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88110..89624
-----------------
DNA (1515bp)
protein (505aa)
Peptidoglycan lytic exotransglycosylase {ECO:0000256|SAAS:SAAS00166192}; EC=4.2.2.n1 {ECO:0000256|SAAS:SAAS00166192};; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J874_9DELT
Lytic transglycosylase catalytic
ERMGT100_2_curated_scaffold_2_72
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(89659..90813)
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDG1_9EURY
VIT family
Tax=CG_Anaero_03
ERMGT100_2_curated_scaffold_2_73
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90821..92041)
-----------------
DNA (1221bp)
protein (407aa)
PQQ-dependent oxidoreductase2C gdhB family n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MJ14_CORCM
Glucose dehydrogenase {ECO:0000313|EMBL:AKF82750.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
yliI3; PQQ-dependent oxidoreductase2C gdhB family
ERMGT100_2_curated_scaffold_2_74
Shewanella halifaxensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92113..93225)
-----------------
DNA (1113bp)
protein (371aa)
Putative uncharacterized protein n=1 Tax=Shewanella halifaxensis (strain HAW-EB4) RepID=B0TKW0_SHEHH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ77162.1}; TaxID=458817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella halifaxensis (strain HAW-EB4).;"
ERMGT100_2_curated_scaffold_2_75
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93373..94737
-----------------
DNA (1365bp)
protein (455aa)
hypothetical protein n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B6FFEC
Internalin {ECO:0000313|EMBL:AKF08231.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
ERMGT100_2_curated_scaffold_2_76
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

94734..94922
-----------------
DNA (189bp)
protein (63aa)
LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDY9_9CLOT id=5225882 bin=16ft_combo_ws3_JS1 species=Clostridium celatum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
flagellar hook capping protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_77
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94919..96328)
-----------------
DNA (1410bp)
protein (470aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E062A
Amino acid permease {ECO:0000313|EMBL:GAO56766.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amino acid transporter
ERMGT100_2_curated_scaffold_2_78
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(96371..98680)
-----------------
DNA (2310bp)
protein (770aa)
id=5223378 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Outer membrane receptor protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_2_79
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98936..100768)
-----------------
DNA (1833bp)
protein (611aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI0003677920
conserved hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44543.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
ERMGT100_2_curated_scaffold_2_80
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(100792..103800)
-----------------
DNA (3009bp)
protein (1003aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEE1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAN31876.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
ERMGT100_2_curated_scaffold_2_81
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103886..104500)
-----------------
DNA (615bp)
protein (205aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BDW4_RHILV
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:EJC67882.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
cytochrome c protein
ERMGT100_2_curated_scaffold_2_82
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

104739..106139
-----------------
DNA (1401bp)
protein (467aa)
tryptophanase (EC:4.1.99.1)
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HAMAP-Rule:MF_00544}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Tryptophanase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKC8_MARHT
ERMGT100_2_curated_scaffold_2_83
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106136..107086
-----------------
DNA (951bp)
protein (317aa)
Cysteine synthase A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ43_9FIRM
cysteine synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMGT100_2_curated_scaffold_2_84
unknown

Not on your lists

comp(107100..107420)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2_85
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107417..107764)
-----------------
DNA (348bp)
protein (116aa)
Putative transmembrane protein id=1312401 bin=GWE1_T_denit_62_9 species=Methylotenera mobilis genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
ERMGT100_2_curated_scaffold_2_86
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107818..108129)
-----------------
DNA (312bp)
protein (104aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RFR4_9RHOO
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT100_2_curated_scaffold_2_87
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

108381..108692
-----------------
DNA (312bp)
protein (104aa)
Cold-shock DNA-binding domain protein n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RB91_KANKD
cold-shock DNA-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ERMGT100_2_curated_scaffold_2_88
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

108906..109211
-----------------
DNA (306bp)
protein (102aa)
Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_18 n=1 Tax=Blastocystis hominis RepID=D8M294_BLAHO
Putative uncharacterized protein {ECO:0000313|EMBL:EFC44338.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
tolA; outer membrane integrity protein
Displaying items 61-90 of 156 in total

View Taxonomy