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ERMGT100_2_curated_scaffold_4

Search features with annotation key words

Displaying items 61-90 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_4_57
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(70210..70539)
-----------------
DNA (330bp)
protein (110aa)
Divalent ion tolerance protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFI9_MYXSD id=5223137 bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
CutA1 divalent ion tolerance protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_58
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

70579..72213
-----------------
DNA (1635bp)
protein (545aa)
id=5224312 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_59
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

72210..72623
-----------------
DNA (414bp)
protein (138aa)
Putative uncharacterized protein id=1778237 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ERMGT100_2_curated_scaffold_4_60
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72677..73393)
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GMM8_9GAMM
peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Tax=CG_Delta_03
ERMGT100_2_curated_scaffold_4_61
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73423..74289
-----------------
DNA (867bp)
protein (289aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E651_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV28468.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
methyltransferase
ERMGT100_2_curated_scaffold_4_62
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

74349..77405
-----------------
DNA (3057bp)
protein (1019aa)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLD1_VEREI id=5224050 bin=16ft_combo_ws3_JS1 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_63
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

77516..79057
-----------------
DNA (1542bp)
protein (514aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X926_9CHRO id=5223131 bin=16ft_combo_ws3_JS1 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_64
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79061..80806
-----------------
DNA (1746bp)
protein (582aa)
Oligopeptide transporter, OPT superfamily n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAQ9_ANAD2
oligopeptide transporter
Putative metal-nicotianamine transporter YSL9 {ECO:0000313|EMBL:GAO05317.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
ERMGT100_2_curated_scaffold_4_65
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

80851..83274
-----------------
DNA (2424bp)
protein (808aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MF21_RHOM4 id=5223388 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_66
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

83449..84534
-----------------
DNA (1086bp)
protein (362aa)
RND family efflux transporter MFP subunit n=1 Tax=Xanthomonas sacchari NCPPB 4393 RepID=UPI000262B1A0 id=5224884 bin=16ft_combo_ws3_JS1 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
smmG; HlyD family secretion protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_67
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

84545..87748
-----------------
DNA (3204bp)
protein (1068aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JKG1_9GAMM id=5224883 bin=16ft_combo_ws3_JS1 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acriflavin resistance protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_68
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

87745..90840
-----------------
DNA (3096bp)
protein (1032aa)
acriflavin resistance protein id=24473770 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
acriflavin resistance protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_69
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(90837..91610)
-----------------
DNA (774bp)
protein (258aa)
Methyltransferase, UbiE/COQ5 family n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PPV9_THESS
UbiE/COQ5 family methyltransferase
Tax=RBG_16_NC10_65_8_curated
ERMGT100_2_curated_scaffold_4_70
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(91655..92380)
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9K3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39180.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMGT100_2_curated_scaffold_4_71
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92556..93059
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPX7_SORCE
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
ERMGT100_2_curated_scaffold_4_72
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93149..94444
-----------------
DNA (1296bp)
protein (432aa)
Major facilitator family transporter n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CWQ3_MYXXD
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:ABF92303.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
ERMGT100_2_curated_scaffold_4_73
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

94623..96539
-----------------
DNA (1917bp)
protein (639aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8K6_GEODF
Fis family transcriptional regulator
Tax=RBG_16_NC10_65_8_curated
ERMGT100_2_curated_scaffold_4_74
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(96548..97630)
-----------------
DNA (1083bp)
protein (361aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037A828B
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABJ81457.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_4_75
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(97663..99189)
-----------------
DNA (1527bp)
protein (509aa)
Putative secreted protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5RV07_9PLAN
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:EMI23140.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
ERMGT100_2_curated_scaffold_4_76
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(99230..100567)
-----------------
DNA (1338bp)
protein (446aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGP3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO40993.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
ERMGT100_2_curated_scaffold_4_77
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100803..102089)
-----------------
DNA (1287bp)
protein (429aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SNH1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28238.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
phosphate-selective porin O and P
ERMGT100_2_curated_scaffold_4_78
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102210..103277)
-----------------
DNA (1068bp)
protein (356aa)
L-asparaginase, type II subfamily {ECO:0000313|EMBL:EEB78461.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EEB78461.1};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
L-asparaginase, type II subfamily n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZ08_9GAMM
L-asparaginase
ERMGT100_2_curated_scaffold_4_79
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(103296..104849)
-----------------
DNA (1554bp)
protein (518aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DDFF9
Aspartate ammonia-lyase {ECO:0000313|EMBL:EMS32633.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
Aspartate ammonia-lyase
ERMGT100_2_curated_scaffold_4_80
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104945..106003)
-----------------
DNA (1059bp)
protein (353aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. P2S70.;"
Glutaminase n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FYY8_9GAMM
L-glutaminase
ERMGT100_2_curated_scaffold_4_81
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(106003..107229)
-----------------
DNA (1227bp)
protein (409aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SNR8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAO43970.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
ERMGT100_2_curated_scaffold_4_82
unknown

Not on your lists

comp(107275..107625)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_4_83
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(107889..108569)
-----------------
DNA (681bp)
protein (227aa)
Esterase/lipase, putative n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EKY4_CHLPB
esterase/lipase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_4_84
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(108652..110745)
-----------------
DNA (2094bp)
protein (698aa)
Outer membrane receptor protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKI6_IGNAJ id=5223117 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Outer membrane receptor protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_4_85
unknown

Not on your lists

comp(110803..111462)
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_4_86
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(111581..113221)
-----------------
DNA (1641bp)
protein (547aa)
FG-GAP repeat protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W781_DYAFD
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:ACT94359.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 61-90 of 170 in total

View Taxonomy