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S15_scaffold_34_curated_32

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(36330..37235)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E79689 similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 301.0
  • Bit_score: 563
  • Evalue 6.60e-158
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 301.0
  • Bit_score: 563
  • Evalue 1.90e-158
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAY94429.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 301.0
  • Bit_score: 562
  • Evalue 2.10e-157

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGATAAGCTTGAACAATACCGCGTGTTCATCCAGGTGGCCGACATGGGCAGCTTCATCAAGGCCGCCCATGTCCTGGAACTGCCACGGGCCACCGTCTCCTCCGCCGTGCAGCAACTGGAAACCGGCCTCGGCACGCGCCTGCTGCACCGCACGACCCGGCATGTGCAATTGACCGCCGACGGCGCCATCCTTCTGGAGCGAGCCCGGCGTCTGCTGGCGGATGCATCCGAACTCAGCCAACTGTTCCAGCATCGCCAGGTGGATGTCAGTGGACGTTTGAACATCGACGTACCCAGCCGCATCGCCCGGCGCCTGATCGTGCCCGCCCTGCCCCAATGGCTGGCGCAATACCCCGACCTGCAACTGGCGCTGGGGGCCTGCGATCGCAGCATCGACCTGGTCCAGGAAGGCATCGACTGCGCGATCCGCGTCGGCAGCCTGGCGGACAGCAGCCTGATCGCCCGTCCCCTGGGGCGCCTGGCGCTGATCAACTGCGCCAGCCCCGCCTACCTCGCCGAACATGGCGAGCCTCGAAGCCACCAGGACCTGCAGAACGGCCAGTGGATGGTGGGCTACGCCTCCCCGGACACGGGTCGAGAGCAGCCCTGGGAATACCTGCAGGAAGGTCGCGAGCACCTGCTGGGCCTGCCCAGTCGGGTGATCGTCAACAACGTCGAGAACTACATTGCCTGCTGTCGCCAGGGCCTGGGGCTGATCCAGGTGCCGCGCTTCGATGTGCAGCATCTGCTGGAGCGCGGCGAACTGGTGCAGGTGCTTCATGAACTGCCGGTGGCGCCCATGGAAATCAGCGCACTGTACCCCGACCGCCGCCATCGCTCGCGCCGTCTCAATGTGTTCATCGAATGGTTTGCCGAACTGATCAAACCGCACCTGGAGGCTTGA
PROTEIN sequence
Length: 302
MDKLEQYRVFIQVADMGSFIKAAHVLELPRATVSSAVQQLETGLGTRLLHRTTRHVQLTADGAILLERARRLLADASELSQLFQHRQVDVSGRLNIDVPSRIARRLIVPALPQWLAQYPDLQLALGACDRSIDLVQEGIDCAIRVGSLADSSLIARPLGRLALINCASPAYLAEHGEPRSHQDLQNGQWMVGYASPDTGREQPWEYLQEGREHLLGLPSRVIVNNVENYIACCRQGLGLIQVPRFDVQHLLERGELVQVLHELPVAPMEISALYPDRRHRSRRLNVFIEWFAELIKPHLEA*