ggKbase home page

S15_scaffold_34_curated_33

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(37346..38119)

Top 3 Functional Annotations

Value Algorithm Source
3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RMN0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 257.0
  • Bit_score: 480
  • Evalue 6.30e-133
  • rbh
Short chain dehydrogenase {ECO:0000313|EMBL:BAQ83066.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 257.0
  • Bit_score: 483
  • Evalue 1.00e-133
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 257.0
  • Bit_score: 480
  • Evalue 1.80e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGGCCGATCATTCCCTGAACAACAAAGTCGTGTTGATTGCCGGAGGGGTGAAAAACCTCGGCGGCCTGATTGCCCGTGATCTTGCCAGCCACGGGGCCAAAGCCGTGGCCGTGCACTACAACAGCAGCGCCAGCCAGGCCGACGCCGAGCGCACCCTGGCGGCGCTCAAGGACCTGGGGGTCGAGGCCCACGCCTGGCAGGCCGACCTCACCAGCGCCAGTGCCGTGGAGCGTCTGTTCAGCGAGGTCAAGGCGCGTTTCGGCAAGATCGACATCGCCATCAACACCGTGGGCAAGGTGCTGAAAAAACCCATAGTCGACATCAGCGAAGACGAGTACGACCAGATGTTTGCGGTCAATGCCAAGAGCGCGTTCTTCTTCATCAAGGAAGCCGGCAAACACTTGGAGGACAACGGCAAGCTGGTGACCCTGGTGACGTCGCTGCTGGGAGCCTTCACCCCGTTCTATGCCACCTATGGCGGTTCCAAGGCACCGGTGGAACACTTCACCCGGGCCGCAGCCAAGGAGTTCGGCGCCCGCGGCATCTCGGTCACCGCTGTAGGGCCAGGCCCCATGGATACACCGTTCTTCTACCCTGCCGAAGGGGACGACGCGGTGGCCTACCACAAGAGCGCCGCGGCCCTGTCGCCTTCGAGCAAGACCGGACTCACTGATATCGAGGATGTGGTGCCCTTCATTCGTCACCTGGTGACCGAGGGTTGGTGGATCACCGGTCAGACCTTACTGATCAACGGCGGCTACACCACCAAGTAA
PROTEIN sequence
Length: 258
MADHSLNNKVVLIAGGVKNLGGLIARDLASHGAKAVAVHYNSSASQADAERTLAALKDLGVEAHAWQADLTSASAVERLFSEVKARFGKIDIAINTVGKVLKKPIVDISEDEYDQMFAVNAKSAFFFIKEAGKHLEDNGKLVTLVTSLLGAFTPFYATYGGSKAPVEHFTRAAAKEFGARGISVTAVGPGPMDTPFFYPAEGDDAVAYHKSAAALSPSSKTGLTDIEDVVPFIRHLVTEGWWITGQTLLINGGYTTK*