ggKbase home page

GD18-4_B1_scaffold_158492

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_158492_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1354
-----------------
DNA (1353bp)
protein (451aa)
Probable pilus assembly ATPAse n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWS4_SORC5
pilus assembly ATPase
Probable pilus assembly ATPAse {ECO:0000313|EMBL:CAN93969.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1372..2061
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y676_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40339.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_158492_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2128..2628
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA1529 RepID=UPI0002DD0CF0
Tax=RBG_16_RIF_CHLX_72_14_curated
GD18-4_B1_scaffold_158492_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2629..4584)
-----------------
DNA (1956bp)
protein (652aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHY2_ANADF
selenocysteine-specific translation elongation factor
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:ABS28328.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_158492_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4586..5161)
-----------------
DNA (576bp)
protein (192aa)
soluble lytic murein transglycosylase precursor (EC:3.2.1.-)
Soluble lytic murein transglycosylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2F0_SORC5
Lytic transglycosylase {ECO:0000313|EMBL:EYF00418.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_158492_6
unknown

Not on your lists

5425..6267
-----------------
DNA (843bp)
protein (281aa)

This feature has no annotations

GD18-4_B1_scaffold_158492_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6324..7352
-----------------
DNA (1029bp)
protein (343aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4B2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF03618.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_158492_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7381..9219
-----------------
DNA (1839bp)
protein (613aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN98178.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN98178.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FH30_SORC5
GD18-4_B1_scaffold_158492_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9220..9981)
-----------------
DNA (762bp)
protein (254aa)
Dipeptide transport system permease protein DppC n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDX5_9DELT
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:EPX60527.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
gsiD; binding-protein-dependent transport system inner membrane protein
GD18-4_B1_scaffold_158492_10
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(9978..10931)
-----------------
DNA (954bp)
protein (318aa)
Putative glutathione ABC transporter, permease protein GsiC n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSW1_BREDI
dipeptide/oligopeptide/nickel ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
GD18-4_B1_scaffold_158492_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10928..11296)
-----------------
DNA (369bp)
protein (123aa)
Collagen triple helix repeat protein {ECO:0000313|EMBL:EYF06295.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_158492_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11428..11733
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FH21_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98175.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_13
unknown

Not on your lists

12063..12455
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

GD18-4_B1_scaffold_158492_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12490..13857)
-----------------
DNA (1368bp)
protein (456aa)
Sun protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FBW8_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF02154.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
sun protein
GD18-4_B1_scaffold_158492_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14265..15947)
-----------------
DNA (1683bp)
protein (561aa)
Membrane-associated protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FBW4_SORC5
membrane-associated protease
Membrane-associated protease {ECO:0000313|EMBL:CAN98058.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_16
unknown

Not on your lists

16033..16317
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

GD18-4_B1_scaffold_158492_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16330..17211
-----------------
DNA (882bp)
protein (294aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNP8_SORCE
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:AKF08422.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_158492_18
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17314..18720)
-----------------
DNA (1407bp)
protein (469aa)
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase id=1716923 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=CG_Syntroph_02
GD18-4_B1_scaffold_158492_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18875..19213)
-----------------
DNA (339bp)
protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESE5_SORC5
glnB; nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CAN97380.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19497..19976
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GWD1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93913.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20000..20416)
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF06733.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_158492_22
unknown

Not on your lists

20439..20546
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

GD18-4_B1_scaffold_158492_23
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20607..24626)
-----------------
DNA (4020bp)
protein (1340aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEU8_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF07406.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_158492_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24684..26345)
-----------------
DNA (1662bp)
protein (554aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK55_SORCE
Ribonuclease J2 (Endoribonuclease in RNA processing) {ECO:0000313|EMBL:EYF01355.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_158492_25
unknown

Not on your lists

26460..27524
-----------------
DNA (1065bp)
protein (355aa)

This feature has no annotations

GD18-4_B1_scaffold_158492_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27698..28894
-----------------
DNA (1197bp)
protein (399aa)
Probable anion transporter ATPase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC02_SORC5
anion transporter ATPase
Probable anion transporter ATPase {ECO:0000313|EMBL:CAN96117.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_158492_27
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28926..31454
-----------------
DNA (2529bp)
protein (843aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRS3_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AKF08544.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_158492_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31456..32160)
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U2D7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV02148.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
GD18-4_B1_scaffold_158492_29
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32177..32848)
-----------------
DNA (672bp)
protein (224aa)
TM2 domain containing protein+B7201 n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4G0G5_METM5
Uncharacterized protein {ECO:0000313|EMBL:KDE57509.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
GD18-4_B1_scaffold_158492_30
unknown

Not on your lists

comp(32848..33663)
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein
Displaying items 1-30 of 107 in total

View Taxonomy