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GOSHIP-P18_170_1_13_153S_1017m_2_797_9

Organism: GOSHIP-P18_170_1_13_153S_1017m_2_Alphaproteobacteria_48_9

near complete RP 43 / 55 BSCG 47 / 51 ASCG 7 / 38 MC: 1
Location: 3790..8097

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 1470.0
  • Bit_score: 1697
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RPOB_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 1470.0
  • Bit_score: 1697
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1208583 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibacter sp. MX01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 1442.0
  • Bit_score: 1699
  • Evalue 0.0

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Taxonomy

Commensalibacter sp. MX01 → Commensalibacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4308
ATGGCGCTGTCGTTCACAGGTCGTAAACGAATTCGTAAGAATTTTGGTCGTATCAAGACAGGCACTACGATGCCAAATCTTATTGAGGTGCAGAAAACTTCCTATGACCACTTTCTCCAACAAGATGTTTCGGGCGAGAATCGAGGTCAGTGGGGGCTCCAAGAAGTTTTCAGTTCGGTTTTTCCGATCAACGATTTTTCGGGAAATTCCCAGTTAAATTTTGTCAAATATGAATTTGAAAAGCCTAAATACGACGTTAGCGAGTGCCAACAACGTGGCATGACTTTTTCTGCTCCCCTTAAAGTCACTTTGCGCTTGATCGTTTGGGATGTCGACGAAGAGACTGGTGCCAGAACAGTTCGTGACATCAAAGAGCAAGATGTTTTTATGGGAGACCTGCCCTTCATGACAGATAAGGGCACATTTATTATCAATGGGACTGAACGAGTAATCGTTAGTCAAATGCATCGTTCTCCCGGTGTATTTTTTGACCATGATAAGGGCAAGACTCACGCTTCAGGAAAATTGTTATTCGCTGCAAGAATAATACCGTACCGCGGGTCTTGGCTTGATTTTGAGTTTGATGCAAAGGACATCGTCTTTGTGCGGATTGATCGTAGGCGAAAACTACAAGTTGTAACTTTACTGAGGGCATTGGGTCTCGAAAAAGAAGATATTTTACAAGAATTCTATGGAACGAAAATTTATAAGCGTAGCAAAGATGGTTGGCGTGTCCGGTTCGATGTATCGAGAATACATGGCGTTAAACTCAACTATGACCTCGTTGATGCTAAGACAGGTAGTGTCGTTGCGGAAACTGGAGAACGCGTTACTGGACGAAGGGCTCGTGAAATAGAAAAGGCGGGCCTGCGAGAGTATCTTGCTCCAATTGAAGAGCTGAAGATGCAGTACGTTGCGAACGACATCATTGAAGAGAAGACGGGTCTTATTCTGGCTGAAGCCGGTGACGAGATTACTGATGAGCTGTTGGAGGAATTTGAGAAGGGACAAATAAAGTCATTTTCTGCCTTGGAGCTAGAGCCAGGGACAGACCCCCACATTCGTAATACGTTGTCGGTAGACAAAAATAATACGCGTCTTGAGGCGCTGACTGACATATACCGTGTTATGCGACCGGGAGAACCACCAACCGAAGAAAGTGCCGAGCGCTTATTTTACGATTTGTTTCTGAGCCCGGTAAAACTGCTTAAGGACCAAGTCGAGGCCCGAAACCTTCCTGACCTGAAAGCTGAAGTAGTGACGGAGCTAAATATTGTTGATTTTGAAGGTGGTGCGTGGTTGTTAGATGCAAGAGATGGTTTTGCGCTGGTATCTTTATCATGCACTTTTTCTCGCCCTGCAAAGTTGCCCCATGCGCTTTGGGTTAAGGACTCGGATATCGAGATGGTTCGTTCCGAACGTTATGATCTTTCCTCGGTAGGACGTGTCAAAATGAACTCCCGCTTAGGTCTTGAAACACCAGATACTGCTAGAGAACTTCGGCGTGAAGATATTGTCGCAGTAATCCAGACGATTATTGATCTTCGGAACGGGAAAGGTGATGTTGATGATATTGATCACCTGGGAAACCGACGCGTAAGATCTGTTGGCGAACTTATGGAGAACCAATATCGGATTGGTTTGCTGCGGATGGAACGGGCGATCCGAGAACGGATGAGTTCTGTTGAAATAGATGCGGCTATGCCGCACGATTTGGTTAATGCTAAACCAGCCGCGGCAGCTGTTCGTGAATTCTTTGGATCTTCCCAGTTATCACAATTCATGGATCAAACCAATCCGCTGTCTGAGATTACACATAAACGTCGGCTATCTGCACTTGGTCCCGGTGGGCTGACGCGTGAAAGAGCAGGGTTTGAGGTCCGCGATGTTCATCCAACCCATTACGGCCGCATTTGTCCAATTGAAACACCAGAAGGACCAAACATAGGCCTTATTAACAGTCTCGCGACTTATGCTCGGGTTAACCAGTACGGTTTTATAGAGAGCCCTTACTGCAAGGTTGTTAAAGGTAGAGTGACGAGCGATGTTGAATACCTGTCGGCGATGGATGAAGGAAAATATACCATTGCCCAAGCCAACGCTTCCCTTACAAGAACTGGCAAACTCGCGAGTGATTTGGTTAGTTGTCGATTGAACGGCGACTTCGTTATGGCCGAGCCAGATACAGTAGATTATATTGATGTGTCGCCAAAACAGTTGGTATCGGTTGCTGCCGCTCTGATCCCGTTTTTAGAAAATGACGATGCAAATAGGGCCCTTATGGGTTCCAATATGCAACGGCAGGCAGTGCCGTTGATCCGAGCTGAGGCACCGCTTGTTGGAACTGGTATGGAGGAAGTAGTTGCTACTGACTCAGGTGCTACTGTCATCGCTGCACGTGGTGGTCTTATTGATCAGGTAGATTCCAGAAGAATTGTTGTACGAGTTGATGACCATGATGATGATTCTGGGACCGGCGTCGATATATACAATTTATTGAAGTTTCAGCGCTCCAATCAGAATACTTGTATCAATCAGCGGCCACTTGTTTCAGTCGGCGACACGGTCCGAGTAGGAGATATTATCGCGGATGGACCATCTACTGACCTTGGGGAATTGGCTTTAGGTAGGAATATTTTGGTCGCGTTTATGCCCTGGCACGGATACAACTTTGAGGACTCTATCCTAGTTTCGGAGCGTATCGTCCGTGATGACGTCTTTACCTCAAGTCATATTGAGGAATTTGAGGTGATGGCGCGCGATACTAAGCTGGGGCCAGAAGACATTACCCGTGATATCCCTAATGTCAGTGATGAAGCTTTAAGAAATTTGGATGAGGCTGGTATTGTCTACATCGGAGCTGAACTGAATCCTGGTGACATTCTGGTGGGTAAAATCACTCCAAAAGGTGAGTCACCTCAGACGCCAGAAGAAAAATTGCTGCGAGCAATCTTTGGCGAAAAGGCGTCAGATGTAAGAGATACCTCCTTAAAGCTGCCTCCGGGTGTTTCTGGGACCGTTGTGGAAGTCCGCGTGTTTTCGCGGAGGGGCATAGATAAAGATGAAAGGGCTTTAGCGATAGAAAGTGCTGAAATTGATCGCTTGGCCAAGGATCGAGATGATGAACGTAAAATCATTGAGAGTAATGTCTACGACCGTCTTCAAATTTTGTTAAATAACCAGATCGCCACTTCTGGACCAAAAGAATTTGTTTCTGGCACCCGTGTCACGGCGGCTGCGTTGGAGAAGTACCGCAGAAACGAGTGGTGGCAATTTGCTCTCAAACAGGAAAAAAGAATGGTGAGTGTCGAGTCTTTGAAGAAAGAACTCGACGCTGCCAAACAGCGCCTGCAGGAGAAATTTGAAGAGCGAGTGGAGAAAGTCCAAAGTGGCGACGAATTGCTACCCGGCGTACTCAAGATGGTGAAAGTTTTCGTTGCCGTTAAGCGCAAAATTCAGTCTGGTGATAAAATGGCTGGTCGACACGGTAATAAAGGGGTGATTTCTCGTATTGTGCCCATTGAGGATATGCCGCATTTGGAAGATGGAACCGCTGTGGATGTTGTGCTTAATCCGTTGGGTGTACCATCTCGAATGAATGTGGGACAGATATTAGAAACGCACCTAGGATGGGCAACTCACGCGCTTGGTGCAAGGATTTCAAAATTGATTGATAGGTATGCTGAAACTAATGTTGATGAACCTATTCGACGAGAACTTTCCCGCATCTACAAAGATCAGTCGGAGGCGGACGAGTTGAAAGGGTTTCAGAGCGAAGAGATATTTGAATTGGCAAGCAACTTGCGCAATGGAATCCCGATAGCCACTCCAGTATTTGATGGGGCTCATGAGGGTGATATTGATGACATGCTCAGTGATGCGGGGTTGGATGGTAGTGGCCAAACTACATTAATCGATGGGCGTACTGGAGAAGTTTTTGATAGGCCCATCACCGTTGGGTACATCTACATGCTTAAACTTCATCATCTGGTGGATGATAAAATCCATGCGCGTTCTATCGGCCCATATAGTTTAGTTACGCAGCAGCCGTTAGGGGGTAAGGCTCAGTTTGGTGGCCAACGGTTTGGAGAGATGGAGGTTTGGGCGCTCCAGGCCTATGGGGCAGCATACACATTACAGGAAATGTTAACCGTTAAGTCAGATGACGTGTCGGGGAGAACCAAGGCATATGAGGCGGTGGTCCGAGGTGATGACACATTTGAAGCGGGTATTCCAGAGTCCTTTAACGTTTTGGTGAAAGAGCTTCAGGCTTTGGGACTCGATGTGGATTTGAGGAACATTGGATAA
PROTEIN sequence
Length: 1436
MALSFTGRKRIRKNFGRIKTGTTMPNLIEVQKTSYDHFLQQDVSGENRGQWGLQEVFSSVFPINDFSGNSQLNFVKYEFEKPKYDVSECQQRGMTFSAPLKVTLRLIVWDVDEETGARTVRDIKEQDVFMGDLPFMTDKGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHASGKLLFAARIIPYRGSWLDFEFDAKDIVFVRIDRRRKLQVVTLLRALGLEKEDILQEFYGTKIYKRSKDGWRVRFDVSRIHGVKLNYDLVDAKTGSVVAETGERVTGRRAREIEKAGLREYLAPIEELKMQYVANDIIEEKTGLILAEAGDEITDELLEEFEKGQIKSFSALELEPGTDPHIRNTLSVDKNNTRLEALTDIYRVMRPGEPPTEESAERLFYDLFLSPVKLLKDQVEARNLPDLKAEVVTELNIVDFEGGAWLLDARDGFALVSLSCTFSRPAKLPHALWVKDSDIEMVRSERYDLSSVGRVKMNSRLGLETPDTARELRREDIVAVIQTIIDLRNGKGDVDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIRERMSSVEIDAAMPHDLVNAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNQYGFIESPYCKVVKGRVTSDVEYLSAMDEGKYTIAQANASLTRTGKLASDLVSCRLNGDFVMAEPDTVDYIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIRAEAPLVGTGMEEVVATDSGATVIAARGGLIDQVDSRRIVVRVDDHDDDSGTGVDIYNLLKFQRSNQNTCINQRPLVSVGDTVRVGDIIADGPSTDLGELALGRNILVAFMPWHGYNFEDSILVSERIVRDDVFTSSHIEEFEVMARDTKLGPEDITRDIPNVSDEALRNLDEAGIVYIGAELNPGDILVGKITPKGESPQTPEEKLLRAIFGEKASDVRDTSLKLPPGVSGTVVEVRVFSRRGIDKDERALAIESAEIDRLAKDRDDERKIIESNVYDRLQILLNNQIATSGPKEFVSGTRVTAAALEKYRRNEWWQFALKQEKRMVSVESLKKELDAAKQRLQEKFEERVEKVQSGDELLPGVLKMVKVFVAVKRKIQSGDKMAGRHGNKGVISRIVPIEDMPHLEDGTAVDVVLNPLGVPSRMNVGQILETHLGWATHALGARISKLIDRYAETNVDEPIRRELSRIYKDQSEADELKGFQSEEIFELASNLRNGIPIATPVFDGAHEGDIDDMLSDAGLDGSGQTTLIDGRTGEVFDRPITVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVSGRTKAYEAVVRGDDTFEAGIPESFNVLVKELQALGLDVDLRNIG*