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GOSHIP-P18_170_1_13_153S_1017m_2_797_10

Organism: GOSHIP-P18_170_1_13_153S_1017m_2_Alphaproteobacteria_48_9

near complete RP 43 / 55 BSCG 47 / 51 ASCG 7 / 38 MC: 1
Location: 8168..12361

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 1374.0
  • Bit_score: 2057
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS32_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 1374.0
  • Bit_score: 2057
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 1374.0
  • Bit_score: 2057
  • Evalue 0.0

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4194
ATGAAGGATCTGGTGAGCGTATTTAGGCCGGTCAGTGCATCTCAGGACTTTGATGAAATTCGAATTTCAATTGCGAGCCCTGAAAAAATCAGATCATGGTCCTATGGAGAAGTTAAGAAGCCCGAGACAATCAACTACCGGACCTTTAAGCCGGAGCGAGAGGGCCTTTTCTGCGCCAAAATTTTTGGACCCATTAAAGATTATGAGTGCTTATGTGGCAAATATAAGCGGATGAAACACCGTGGTATTGTTTGTGAAAAATGTGGTGTGGAGGTGATTCAATCGAAAGTACGTCGTGAGCGAATGGGCCACATCGAATTGGCAGCCCCCGTAGCTCATATTTGGTTTCTTAAGTCTTTACCGTCCCGAATAGGGCTTTTGCTTGATATGACTCTCAAGGAAATTGAGAGGATTCTTTATTTTGAAAACTATGTTGTCACCGAGCCGGGTTTAACCCCTCTCGAGCGCCTTCAGACACTTACGGAAGATGGCTATAGGAAAGCGATAGATGAGTATGGAGCCGACTCTTTCACCGCTGGAATAGGTGCCGAGGTAATACGCGGTATCCTGTCTGGCTTAGATCTGGAGGACGAACGTGTTTCACTTCGTACGGATATCGCGGAAACTAATTCAGAGGCCAAGCGAAAAAAGTTTGTAAAACGACTAAAATTGGTAGAGGCCTTCATTAATTCTGGCAACCGTCCTGAGTGGATGATATTTGAAGTTCTTCCAGTCCTTCCGCCGGAGCTTAGGCCCCTCGTACCGCTGGACGGAGGTAGATTTGCGACCTCAGATCTCAATGACCTATATCGAAGAGTGATCAATCGAAACAACCGATTAAAGCGCTTACTGGAGCTCCGAGCGCCAGACATAATCGTGCGAAATGAGAAGCGTATGCTGCAGGAGGCTGTTGATGCTTTATTTGATAACGGGCGTCGGGGTCGCGTTATAACGGGTGCTAACAAAAGGCCGCTAAAGTCGCTTGCGGATATGCTTAAGGGAAAACAAGGTAGATTTAGGCAGAATCTTCTTGGTAAGCGCTGTGATTATTCAGGGCGGTCGGTGATTGTCGTGGGTCCGGAACTCAAACTCCACCAATGCGGTATTCCAAAGAAGATGGCTCTCGAGTTATTCAAACCATTTATCTACGCTCGGCTTGAGGCCTACGCGATGGCGACGACAATCAAGGCCGCCAAGCGCATGGTGGAACGTGAACGTCCTGAGATTTGGGATATATTGGAAGAGGTGATCCGAGAGCATCCAGTCTTGCTAAATCGTGCTCCAACACTTCATCGCCTTGGAATCCAAGCATTTGAACCCGTTTTGATTGAAGGAAAAGCTATCCAACTGCATCCGCTTGTTTGTTCAGCTTTTAATGCAGATTTTGATGGTGATCAGATGGCTGTGCATGTGCCGTTATCGCTAGAAGCTCAACTTGAGGCACGCGTCTTGATGATGTCGACCAATAATATTCTGAGCCCCGCAAACGGTAAACCGGTCATTGTACCGACGCAGGACATTGTGCTTGGCTTATACTATCAAACGTATAGTCGCCCTGGTCTTGCTGGGCACGGAAAGGCATTTGGCACCGTTTCTGAAATTAAACATGCACTGGAAGTCGAGGCTGTCCTACTTCATACGGAAATTAAGGCTCGACTTGAGACCTATGACGACCGGGGAAATGAAGTGACGTTGTTGTCTGACACAACTCCTGGACGGATGCTGTTATCTGAGATTTTGCCTAAGAATCCGAAAATCAGCTTTTCACTGATCAATAAACTTTTGACCAAGAAAGAAATTAGCCAGGTAATCGAGGTTGTTTATCGGCACTGTGGTCAGAAAGAGACAGTCATATTTGCAGACCAGTTGATGCAAATGGGTTTCAATCGCGCCTGTGCTGCTGGAATTTCGTTTGGTAAGGACGACATGGTGGTACCGGAGACCAAGCAAAATTTGGTAGATCAGACGCGCAGTCTAGTTAAGGAATTTGAAGGTCAATACGCTGAAGGCTTGATCACTCAGGGCGAGAAATATAACAAGGTAATCGATGCCTGGTCTCAATGTACGGACCAAGTCGCAGATGAAATGATGAGAGAAATATCGAGCACGGATGCTGTAGGAGAAGAGGGGAATGCATCGTCAATCAATTCGATTTATATGATGGCCCACTCTGGTGCTCGAGGTTCTGCCGCACAGATGAAGCAGCTCGCTGGTATGCGTGGTTTGATGGCTAAACCGTCGGGTGAAATAATTGAGACACCTATAATTTCTAATTTTAAGGAAGGTTTGTCGGTACTAGAGTACTTTAACTCAACCCATGGTGCCCGTAAGGGGCTTGCGGATACAGCTCTAAAAACGGCGAATTCTGGATATCTGACACGACGTCTAGTCGATGTAGCTCAGGATGTAATTATTACGGAAGATGATTGTGGCACTACTAAGGGTCTTAAAGTTAGGGCGATAATTGATGGTGGTGAAATAATAGATCCTTTGTCCGACCGAGTCTTGGGCCGGACAATTTCAGAAGATGTCGTTGATCCGTCCGATGATAACGTTTTGATTAAGGCGGGGACATTAATTGAGGAACCCCAAGTTGTAGAAATTGAAGCGGCGGGCATTGAAGAAATGCAGATCCGTTCGGTTCTGACCTGTGAGAGCAAAGAAGGTGTATGTGTTAAGTGCTATGGTCGTGATCTTGCGCGTGGCACGGTTGTAAATATTGGGGAGGCTGTCGGCGTTATAGCAGCCCAGTCAATTGGCGAGCCCGGCACACAACTTACTATGAGAACATTTCATATCGGCGGGGCTGTTCATCAGGAAGCTACGCAAGCAAGCATCGAGAGTACGATGGAAGGTGTTGTCAAAATTGTTAACCGGGCCGTGGTGGTCTCGTCAGACGGTGTTCCAATTGTGATGAACCGAAAATGTCAGTTGCTTCTGCTGGACGAAAAAGATAGGGAGCGTGCCCGTTACCGTGTGCCGTATGGAAGTCGTTTGTTGTATGATGAAGGAGCAAAAGTACAAAGAGGTTATAAGTTGGCCGAGTGGGACCCTCATACACGACCTATAATCACCGAAAAAAGTGGGATCATTCAGTTTGCCGACCTCAACGATGGCATCAGTGTCCGAGAAGTCACTGACGAAGCTACCGGAATTGCTAGTAGTGTAGTGGTGGAGTGGAAAGCTCAGTCTGGTAAAGGAGATGATCTAAGGCCGCGTTTGGTCATTACCAATAAGAGTGGCAATGCGCTGAAATTGTCAAAAGGCCAAATTGCACAGTATGAGTTGCCTATTGACTCAATTATTGGTGTTGAAAATGGGACCGAAGTTAAGGCCGGAGATGTTATAGCGCGTATTCCCCAGGAATTTTCGAGAGCAAGAGATATCACGGGGGGTCTTCCCCGTGTTGCGGAGTTGTTTGAGGCGCGGAAACCAAAGGAGCATGCAATTATTAGCGAGTGTGATGGCTACGTGCAGTATGGTAAGGATTATAAGTCGAAGCGCCGAGTGATGGTTGTGCCTGAAGACGACCAGGACAACGCCTCTGAGTATTTAATTCCTAAGGGCAAGCACATAACCGTTCAGGAAGGAGATTTTGTCCAGAAGGGAGATCTTTTGATGGATGGGAACCCAGTACCTCACGATATCCTGAGAGTGCTGGGTGTTGCGCAGCTCGCTGATTATCTTGTTAATGAGATCCAAGAAGTTTACCGACTTCAGGGGGTGAAAATTAACGATAAGCACATAGAGGTAATTTGTCGTCAGATGCTACAAAAGGTTGAAATCGTTGATGCTGGCGACACGACATTTTTGGTGGGTGAGCATGTGGACCGTACTGAATTCAATGCAGATAATGATCGCGTGTCTACAGACGGAGGGCAGCCGGCACAGTCGTTGCCGGTGTTGCAGGGAATAACAAAAGCAAGCCTCCAGACTAGTTCTTTCATTTCTGCGGCGTCGTTCCAGGAAACAACAAGGGTTCTGACCGAAGCCGCAGTCAATGGTAGGGCAGATGGGCTGCATGGTCTAAAAGAGAACGTTATTGTTGGTCGCCTGATCCCTGCAGGGACGGGACGTCAAGTCAACAATGTCAAGCAAATTGCTGCAGAAAGGGACCGTGAGATAGTCCAAGCACGGGCTGAAGCCCTGAAAGTTGAGAAGGCAAAGGAAGCTGAAACCGAAATAGCGGTGTAG
PROTEIN sequence
Length: 1398
MKDLVSVFRPVSASQDFDEIRISIASPEKIRSWSYGEVKKPETINYRTFKPEREGLFCAKIFGPIKDYECLCGKYKRMKHRGIVCEKCGVEVIQSKVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMTLKEIERILYFENYVVTEPGLTPLERLQTLTEDGYRKAIDEYGADSFTAGIGAEVIRGILSGLDLEDERVSLRTDIAETNSEAKRKKFVKRLKLVEAFINSGNRPEWMIFEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPDIIVRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRCDYSGRSVIVVGPELKLHQCGIPKKMALELFKPFIYARLEAYAMATTIKAAKRMVERERPEIWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPVIVPTQDIVLGLYYQTYSRPGLAGHGKAFGTVSEIKHALEVEAVLLHTEIKARLETYDDRGNEVTLLSDTTPGRMLLSEILPKNPKISFSLINKLLTKKEISQVIEVVYRHCGQKETVIFADQLMQMGFNRACAAGISFGKDDMVVPETKQNLVDQTRSLVKEFEGQYAEGLITQGEKYNKVIDAWSQCTDQVADEMMREISSTDAVGEEGNASSINSIYMMAHSGARGSAAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDVIITEDDCGTTKGLKVRAIIDGGEIIDPLSDRVLGRTISEDVVDPSDDNVLIKAGTLIEEPQVVEIEAAGIEEMQIRSVLTCESKEGVCVKCYGRDLARGTVVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAVHQEATQASIESTMEGVVKIVNRAVVVSSDGVPIVMNRKCQLLLLDEKDRERARYRVPYGSRLLYDEGAKVQRGYKLAEWDPHTRPIITEKSGIIQFADLNDGISVREVTDEATGIASSVVVEWKAQSGKGDDLRPRLVITNKSGNALKLSKGQIAQYELPIDSIIGVENGTEVKAGDVIARIPQEFSRARDITGGLPRVAELFEARKPKEHAIISECDGYVQYGKDYKSKRRVMVVPEDDQDNASEYLIPKGKHITVQEGDFVQKGDLLMDGNPVPHDILRVLGVAQLADYLVNEIQEVYRLQGVKINDKHIEVICRQMLQKVEIVDAGDTTFLVGEHVDRTEFNADNDRVSTDGGQPAQSLPVLQGITKASLQTSSFISAASFQETTRVLTEAAVNGRADGLHGLKENVIVGRLIPAGTGRQVNNVKQIAAERDREIVQARAEALKVEKAKEAETEIAV*