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GOSHIP-P18_170_1_13_153S_1017m_2_797

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_797_1
Leptospira yanagawae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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2..127
-----------------
DNA (126bp)
protein (42aa)
tuf; elongation factor Tu
Elongation factor Tu n=3 Tax=Leptospira RepID=K5BR51_LEPME
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1249483 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_trna_1
unknown

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193..265
-----------------
DNA (73bp)
transferRNA Trp
GOSHIP-P18_170_1_13_153S_1017m_2_797_2
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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314..511
-----------------
DNA (198bp)
protein (66aa)
preprotein translocase subunit SecE
Protein translocase subunit SecE n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNZ6_TISMK
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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518..1045
-----------------
DNA (528bp)
protein (176aa)
nusG; component in transcription antitermination
Transcription termination/antitermination protein NusG n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2H5_MAGSA
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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1129..1560
-----------------
DNA (432bp)
protein (144aa)
rplK; 50S ribosomal subunit protein L11
50S ribosomal protein L11 n=1 Tax=Woodsholea maritima RepID=UPI00037E0564
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_5
EDTA-degrading bacterium BNC1, Alphaproteobacteria, Proteobacteria, Bacteria

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1566..2279
-----------------
DNA (714bp)
protein (238aa)
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=RL1_MESSB
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=85561 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="EDTA-degrading bacterium BNC1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_6
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2585..3103
-----------------
DNA (519bp)
protein (173aa)
rplJ; 50S ribosomal subunit protein L10
50S ribosomal protein L10 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4C8_9PROT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_7
Commensalibacter intestini, Commensalibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3167..3541
-----------------
DNA (375bp)
protein (125aa)
50S ribosomal protein L12
50S ribosomal protein L7/L12 n=1 Tax=Commensalibacter intestini A911 RepID=G6EXI9_9PROT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1088868 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibacter intestini A911.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_8
unknown

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3550..3675
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_797_9
Commensalibacter sp. MX01, Commensalibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3790..8097
-----------------
DNA (4308bp)
protein (1436aa)
DNA-directed RNA polymerase subunit beta
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=RPOB_SPHWW
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1208583 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibacter sp. MX01.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8168..12361
-----------------
DNA (4194bp)
protein (1398aa)
rpoC; DNA-directed RNA polymerase subunit beta'
DNA-directed RNA polymerase subunit beta' n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS32_AZOS1
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_11
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12592..13029
-----------------
DNA (438bp)
protein (146aa)
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 n=2 Tax=Rhodospirillum rubrum RepID=RS12_RHORT
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_12
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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13055..13525
-----------------
DNA (471bp)
protein (157aa)
rpsG; 30S ribosomal subunit protein S7
30S ribosomal protein S7 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4D7_9PROT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_797_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13559..15688
-----------------
DNA (2130bp)
protein (710aa)
fusA; elongation factor Tu
Elongation factor G n=1 Tax=Oceanibaculum indicum P24 RepID=K2IYJ9_9PROT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Displaying 14 items

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