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gwa2_scaffold_63

Alias: GW2011_AR5_1

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Displaying items 1-30 of 274 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_63_1
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(80..535)
DNA (456bp) protein (152aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=41)
coiled-coil (db=Coil db_id=coil from=43 to=82 evalue=NA)
seg (db=Seg db_id=seg from=6 to=20)
gwa2_scaffold_63_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(609..1085)
DNA (477bp) protein (159aa)
50S ribosomal protein L11 n=4 Tax=Methanocaldococcus RepID=RL11_METJA
rpl11p; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=AR5
rpl11p; 50S ribosomal protein L11
seg (db=Seg db_id=seg from=19 to=29)
gwa2_scaffold_63_3
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(1088..1528)
DNA (441bp) protein (147aa)
Transcription antiterminator n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFD5_9EURY
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=AR5
NusG antitermination factor
seg (db=Seg db_id=seg from=45 to=53)
gwa2_scaffold_63_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(1529..1672)
DNA (144bp) protein (48aa)
SecE-related protein; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=24 to=39)
Preprotein translocase SecE subunit (db=superfamily db_id=SSF103456 from=2 to=47 evalue=2.7e-11 interpro_id=IPR023391 interpro_description=Protein translocase SecE domain)
gwa2_scaffold_63_5

Not on your lists

comp(1739..2821)
DNA (1083bp) protein (361aa)
Cell division protein FtsZ n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QDW0_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Cell division protein FtsZ
FTSZ_1 (db=PatternScan db_id=PS01134 from=59 to=93 evalue=0.0 interpro_id=IPR020805 interpro_description=Cell division protein FtsZ, conserved site GO=Molecular Function: GTP binding (GO:0005525), Cellular Component: cytoplasm (GO:0005737))
gwa2_scaffold_63_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(3109..3798)
DNA (690bp) protein (230aa)
FKBP-type peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=AR5
FKBP-type peptidylprolyl isomerase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VSD0_9EURY
FKBP-type peptidylprolyl isomerase
no description (db=Gene3D db_id=G3DSA:3.10.50.40 from=2 to=100 evalue=1.4e-19)
gwa2_scaffold_63_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

3902..4108
DNA (207bp) protein (69aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=21 to=44)
gwa2_scaffold_63_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

4111..4398
DNA (288bp) protein (96aa)
alias=gwa2_scaffold_63_8 Tax=AR5
gwa2_scaffold_63_9

Not on your lists

comp(4665..5609)
DNA (945bp) protein (315aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1579367 species="Archaea.;" sourc
Leucine--tRNA ligase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA92_METEZ
leucyl-tRNA synthetase
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=1 to=52 evalue=1.4e-09)
gwa2_scaffold_63_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5585..7366)
DNA (1782bp) protein (594aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=AR5
leucyl-tRNA synthetase (EC:6.1.1.9)
Leucine--tRNA ligase n=1 Tax=uncultured crenarchaeote MCG RepID=B2YI69_9CREN
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=3 to=554 evalue=2.3e-65 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
gwa2_scaffold_63_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

7687..8454
DNA (768bp) protein (256aa)
Cell division ATPase MinD, archaeal n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QDV4_9EURY
cell division ATPase MinD; K03609 septum site-determining protein MinD Tax=AR5
cell division ATPase MinD
seg (db=Seg db_id=seg from=7 to=20)
gwa2_scaffold_63_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8545..8790)
DNA (246bp) protein (82aa)
MtN3 and saliva related transmembrane protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KY42_9FLAO
MtN3 and saliva related transmembrane protein; K15383 MtN3 and saliva related transmembrane protein Tax=AR5
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwa2_scaffold_63_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(8861..10519)
DNA (1659bp) protein (553aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Pyrococcus sp. ST04 RepID=I3REL6_9EURY
phenylalanyl-tRNA synthetase subunit beta Tax=AR5
phenylalanyl-tRNA synthetase
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (db=HMMPanther db_id=PTHR10947 from=94 to=552 evalue=1.9e-77)
gwa2_scaffold_63_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(10519..11778)
DNA (1260bp) protein (420aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=AR5
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJ36_THEBM
phenylalanyl-tRNA synthetase subunit alpha
PHENYLALANYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11538:SF15 from=1 to=416 evalue=1.4e-101)
gwa2_scaffold_63_15
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(11820..12047)
DNA (228bp) protein (76aa)
alias=gwa2_scaffold_63_15 Tax=AR5
gwa2_scaffold_63_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


12528..14036
DNA (1509bp) protein (503aa)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=AR5
NEQ417 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74N31_NANEQ
hypothetical protein
(db=HMMPfam db_id=PF00587 from=49 to=317 evalue=1.1e-41 interpro_id=IPR002314 interpro_description=Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
gwa2_scaffold_63_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14080..14262
DNA (183bp) protein (61aa)
hypothetical protein Tax=AR5
gwa2_scaffold_63_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(14281..15411)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein Ta0812 n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HJZ8_THEAC
CBS domain-containing protein Tax=AR5
hypothetical protein
seg (db=Seg db_id=seg from=352 to=363)
gwa2_scaffold_63_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(15420..16001)
DNA (582bp) protein (194aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=AR5
tRNA intron endonuclease n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGE6_9EURY
tRNA-splicing endonuclease subunit alpha
TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 (db=HMMPanther db_id=PTHR21227 from=50 to=129 evalue=1.3e-06)
gwa2_scaffold_63_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(16143..16715)
DNA (573bp) protein (191aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=39)
coiled-coil (db=Coil db_id=coil from=49 to=70 evalue=NA)
seg (db=Seg db_id=seg from=82 to=98)
gwa2_scaffold_63_21
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(16763..16969)
DNA (207bp) protein (69aa)
alias=gwa2_scaffold_63_21 Tax=AR5
gwa2_scaffold_63_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

17023..17217
DNA (195bp) protein (65aa)
alias=gwa2_scaffold_63_22 Tax=AR5
gwa2_scaffold_63_23
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

18024..18200
DNA (177bp) protein (59aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
no description (db=HMMSmart db_id=SM00679 from=26 to=57 evalue=0.0091 interpro_id=IPR006603 interpro_description=Cystinosin/ERS1p repeat)
(db=HMMPfam db_id=PF04193 from=31 to=57 evalue=4.5e-07)
gwa2_scaffold_63_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(18324..19439)
DNA (1116bp) protein (372aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=AR5
DNA topoisomerase (ATP-hydrolyzing) n=4 Tax=Candidatus Parvarchaeum RepID=D2EGK9_9EURY
DNA topoisomerase ATP-hydrolyzing
seg (db=Seg db_id=seg from=360 to=371)
gwa2_scaffold_63_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(19414..21057)
DNA (1644bp) protein (548aa)
type 2 DNA topoisomerase 6 subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=AR5
DNA topoisomerase VI, subunit B
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT53_ARCVS
TWO COMPONENT SENSOR HISTIDINE KINASE (PHOR) (db=HMMPanther db_id=PTHR23283:SF34 from=47 to=95 evalue=0.00096)
gwa2_scaffold_63_26
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(21035..21538)
DNA (504bp) protein (168aa)
KH type 1 domain protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GGD0_METPE
RNA-processing protein; K06961 ribosomal RNA assembly protein Tax=AR5
RNA-processing protein
seg (db=Seg db_id=seg from=37 to=49)
gwa2_scaffold_63_27
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(21593..21892)
DNA (300bp) protein (100aa)
Translation initiation factor 1A n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=IF1A_METST
translation initiation factor IF-1A; K03236 translation initiation factor 1A Tax=AR5
translation initiation factor IF-1A
eIF-1A: translation initiation factor eIF-1A (db=HMMTigr db_id=TIGR00523 from=1 to=97 evalue=1.9e-30 interpro_id=IPR001253 interpro_description=Translation initiation factor 1A (eIF-1A) GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
gwa2_scaffold_63_28
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(21898..22242)
DNA (345bp) protein (115aa)
alias=gwa2_scaffold_63_28 Tax=AR5
gwa2_scaffold_63_29
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(22243..22842)
DNA (600bp) protein (200aa)
Nmd3 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUW9_METMJ
Nmd3 Tax=AR5
seg (db=Seg db_id=seg from=140 to=151)
(db=HMMPfam db_id=PF04981 from=3 to=199 evalue=5.9e-17 interpro_id=IPR007064 interpro_description=NMD3)
gwa2_scaffold_63_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(22874..23941)
DNA (1068bp) protein (356aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Displaying items 1-30 of 274 in total

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