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gwf2_scaffold_503

Alias: PER_GWF2_43_18_3

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Displaying items 31-60 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_503_31
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(28538..29098)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02445.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=131 to=145)
gwf2_scaffold_503_32
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

29327..32869
-----------------
DNA (3543bp)
protein (1181aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=PER_GWF2_43_17
DNA-directed RNA polymerase subunit beta n=2 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THS3_9CHLR rbh
DNA-directed RNA polymerase subunit beta
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=2 to=1116 evalue=0.0)
gwf2_scaffold_503_33

Not on your lists

32901..33353
-----------------
DNA (453bp)
protein (151aa)
Single-stranded DNA-binding protein n=2 Tax=Rhodothermus marinus RepID=D0MG88_RHOM4
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=77133 species="Bacteria; environmental samples
hypothetical protein
seg (db=Seg db_id=seg from=126 to=143)
gwf2_scaffold_503_34
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

33386..37228
-----------------
DNA (3843bp)
protein (1281aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=PER_GWF2_43_17
DNA-directed RNA polymerase subunit beta' n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0B7_DEHLB rbh
DNA-directed RNA polymerase subunit beta'
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=9 to=1268 evalue=0.0)
gwf2_scaffold_503_35
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


37309..37722
-----------------
DNA (414bp)
protein (138aa)
SSU ribosomal protein S12p (S23e) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CY26_9CLOT
30S ribosomal protein S12, small subunit ribosomal protein S12 {ECO:0000313|EMBL:KKT02449.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=56 to=63 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_36

Not on your lists


37815..38198
-----------------
DNA (384bp)
protein (128aa)
30S ribosomal protein S7 n=7 Tax=Thermotoga RepID=RS7_THEMA
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S7
seg (db=Seg db_id=seg from=77 to=91)
gwf2_scaffold_503_37
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

38281..38778
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02451.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=6.0)
gwf2_scaffold_503_38
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

39044..41164
-----------------
DNA (2121bp)
protein (707aa)
Elongation factor G n=1 Tax=Leptonema illini DSM 21528 RepID=H2CAM3_9LEPT rbh
fusA; elongation factor G; K02355 elongation factor G Tax=PER_GWF2_43_17
fusA; elongation factor G
EF-G: translation elongation factor G (db=HMMTigr db_id=TIGR00484 from=1 to=700 evalue=0.0 interpro_id=IPR004540 interpro_description=Translation elongation factor EFG/EF2 GO=Molecular Function: translation elongation factor activity (GO:0003746), Molecular Function: GTP binding (GO:0005525), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
gwf2_scaffold_503_39
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

41238..42428
-----------------
DNA (1191bp)
protein (397aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=uncultured beta proteobacterium RepID=H5SH02_9PROT rbh
Elongation factor Tu, elongation factor Tu {ECO:0000313|EMBL:KKT02453.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=278 to=292)
gwf2_scaffold_503_40
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


42605..42937
-----------------
DNA (333bp)
protein (111aa)
30S ribosomal protein S10 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THR7_9CHLR
30S ribosomal protein S10, small subunit ribosomal protein S10 {ECO:0000313|EMBL:KKT02454.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
30S ribosomal protein S10
30S RIBOSOMAL PROTEIN S10 (db=HMMPanther db_id=PTHR11700:SF2 from=1 to=105 evalue=1.3e-48 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
gwf2_scaffold_503_41

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43124..43705
-----------------
DNA (582bp)
protein (194aa)
50S ribosomal protein L3 n=2 Tax=Thermanaerovibrio RepID=D1B5X5_THEAS
50S ribosomal protein L3 {ECO:0000256|RuleBase:RU003906}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
50S ribosomal protein L3
seg (db=Seg db_id=seg from=173 to=184)
gwf2_scaffold_503_42
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


43713..44345
-----------------
DNA (633bp)
protein (211aa)
50S ribosomal protein L4 n=1 Tax=Thermincola potens (strain JR) RepID=D5X9W2_THEPJ
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=PER_GWF2_43_17
50S ribosomal protein L4
(db=HMMPfam db_id=PF00573 from=16 to=203 evalue=1.6e-55 interpro_id=IPR002136 interpro_description=Ribosomal protein L4/L1e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_43
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


44348..44647
-----------------
DNA (300bp)
protein (100aa)
50S ribosomal protein L23 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8I8_AMMDK
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 Tax=PER_GWF2_43_17
50S ribosomal protein L25
60S RIBOSOMAL PROTEIN L23A (db=HMMPanther db_id=PTHR11620 from=1 to=55 evalue=0.00035)
gwf2_scaffold_503_44
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


44649..45500
-----------------
DNA (852bp)
protein (284aa)
50S ribosomal protein L2 n=4 Tax=Thermoanaerobacterium RepID=D9TRV7_THETC rbh
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=PER_GWF2_43_17
rplB; 50S ribosomal protein L2
seg (db=Seg db_id=seg from=117 to=128)
gwf2_scaffold_503_45
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists


45505..45858
-----------------
DNA (354bp)
protein (118aa)
30S ribosomal protein S19 n=2 Tax=Fervidobacterium RepID=RS19_FERNB
30S ribosomal protein S19 {ECO:0000313|EMBL:KKT19310.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
30S ribosomal protein S19
seg (db=Seg db_id=seg from=84 to=117)
gwf2_scaffold_503_46

Not on your lists


45872..46240
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L22 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA88_THEPJ
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
50S ribosomal protein L22
Ribosomal protein L22 (db=superfamily db_id=SSF54843 from=1 to=108 evalue=1.2e-31 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_47
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


46240..47004
-----------------
DNA (765bp)
protein (255aa)
30S ribosomal protein S3 n=3 Tax=Enterococcaceae RepID=F3Y806_MELPT
30S ribosomal protein S3p, small subunit ribosomal protein S3 {ECO:0000313|EMBL:KKT02461.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17
30S ribosomal protein S3p
seg (db=Seg db_id=seg from=235 to=248)
gwf2_scaffold_503_48
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists


47004..47426
-----------------
DNA (423bp)
protein (141aa)
50S ribosomal protein L16 n=14 Tax=Microcystis RepID=RL16_MICAN
50S ribosomal protein L16 {ECO:0000313|EMBL:KKT19307.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
rplP; 50S ribosomal protein L16
RIBOSOMAL_L16_1 (db=PatternScan db_id=PS00586 from=61 to=72 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_49
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


47430..47630
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02463.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=5 to=18)
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=2 to=61 evalue=2.6e-06 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
(db=HMMPfam db_id=PF00831 from=4 to=59 evalue=4.9e-07 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_50
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


47642..47878
-----------------
DNA (237bp)
protein (79aa)
30S ribosomal protein S17 n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E9A8_FLESM
30S ribosomal protein S17, small subunit ribosomal protein S17 {ECO:0000313|EMBL:KKT02464.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
30S ribosomal protein S17
seg (db=Seg db_id=seg from=23 to=41)
gwf2_scaffold_503_51
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


47900..48268
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14 n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VI21_CLOAI
50S ribosomal protein L14, large subunit ribosomal protein L14 {ECO:0000313|EMBL:KKT02465.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
rplN; 50S ribosomal protein L14
RIBOSOMAL_L14 (db=PatternScan db_id=PS00049 from=60 to=86 evalue=0.0 interpro_id=IPR019972 interpro_description=Ribosomal protein L14 conserved site)
gwf2_scaffold_503_52
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


48280..48621
-----------------
DNA (342bp)
protein (114aa)
50S ribosomal protein L24 n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J793_MARPK
50S ribosomal protein L24, large subunit ribosomal protein L24 {ECO:0000313|EMBL:KKT02466.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
50S ribosomal protein L24
seg (db=Seg db_id=seg from=40 to=52)
gwf2_scaffold_503_53
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


48637..49200
-----------------
DNA (564bp)
protein (188aa)
50S ribosomal protein L5 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RL5_HALOH
50S ribosomal protein L5, large subunit ribosomal protein L5 {ECO:0000313|EMBL:KKT02467.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.
50S ribosomal protein L5
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=62 to=78 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_54
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


49216..49440
-----------------
DNA (225bp)
protein (75aa)
SSU ribosomal protein S14p (S29e) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV25_9CLOT
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=PER_GWF2_43_17
hypothetical protein
RIBOSOMAL_S14 (db=PatternScan db_id=PS00527 from=36 to=58 evalue=0.0 interpro_id=IPR018271 interpro_description=Ribosomal protein S14, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_55
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


49434..49862
-----------------
DNA (429bp)
protein (143aa)
30S ribosomal protein S8 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA51_THEID
30S ribosomal protein S8, small subunit ribosomal protein S8 {ECO:0000313|EMBL:KKT02469.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.
30S ribosomal protein S8
RIBOSOMAL_S8 (db=PatternScan db_id=PS00053 from=112 to=129 evalue=0.0 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_56
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


49872..50432
-----------------
DNA (561bp)
protein (187aa)
50S ribosomal protein L6 n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=RL6_CLOTE
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=PER_GWF2_43_17
rplF; 50S ribosomal protein L6
seg (db=Seg db_id=seg from=176 to=186)
gwf2_scaffold_503_57
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


50453..50797
-----------------
DNA (345bp)
protein (115aa)
50S ribosomal protein L18 n=2 Tax=Leptospirillum sp. Group II RepID=A3EVQ5_9BACT
50S ribosomal protein L18, large subunit ribosomal protein L18 {ECO:0000313|EMBL:KKT02471.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
50S ribosomal protein L18
(db=HMMPfam db_id=PF00861 from=7 to=114 evalue=5.3e-32 interpro_id=IPR005484 interpro_description=Ribosomal protein L18/L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_503_58
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


50811..51362
-----------------
DNA (552bp)
protein (184aa)
ribosomal protein S5, partial n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20C7
30S ribosomal protein S5, small subunit ribosomal protein S5 {ECO:0000313|EMBL:KKT02472.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.
rpsE; 30S ribosomal subunit protein S5
seg (db=Seg db_id=seg from=14 to=24)
gwf2_scaffold_503_59
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


51386..51913
-----------------
DNA (528bp)
protein (176aa)
50S ribosomal protein L15 n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=RL15_BACHD
50S ribosomal protein L15, large subunit ribosomal protein L15 {ECO:0000313|EMBL:KKT02473.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
rplO; 50S ribosomal protein L15
seg (db=Seg db_id=seg from=11 to=33)
gwf2_scaffold_503_60
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


51923..53215
-----------------
DNA (1293bp)
protein (431aa)
Protein translocase subunit SecY n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFE6_THET1 rbh
Preprotein translocase subunit SecY, preprotein translocase subunit SecY {ECO:0000313|EMBL:KKT02474.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011
preprotein translocase subunit SecY
seg (db=Seg db_id=seg from=214 to=231)
Displaying items 31-60 of 98 in total

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