Alias: PER_GWF2_43_18_3
| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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gwf2_scaffold_503_61
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
53258..53893
----------------- DNA (636bp) protein (212aa) |
Adenylate kinase, adenylate kinase {ECO:0000313|EMBL:KKT02475.1}; EC=2.7.4.3 {ECO:0000313|EMBL:KKT02475.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium G
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT72_ARCVS
(db=HMMPfam db_id=PF00406 from=5 to=185 evalue=1.4e-34 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: nucleobase-containing compound kinase activity (GO:0019205))
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gwf2_scaffold_503_62
uncultured bacterium, Bacteria
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Not on your lists |
53890..54648
----------------- DNA (759bp) protein (253aa) |
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Desmospora sp. 8437 RepID=F5SID7_9BACL
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=5 to=251 evalue=1.9e-99 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
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gwf2_scaffold_503_63
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
54759..54989
----------------- DNA (231bp) protein (77aa) |
Translation initiation factor IF-1 n=2 Tax=Clostridium RepID=K0B2A2_CLOA9
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=PER_GWF2_43_17
infA; translation initiation factor IF-1
no description (db=HMMSmart db_id=SM00316 from=3 to=76 evalue=0.00016 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1)
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gwf2_scaffold_503_64
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria
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Not on your lists |
55143..55523
----------------- DNA (381bp) protein (127aa) |
30S ribosomal protein S13 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS13_HALOH
30S ribosomal protein S13 {ECO:0000313|EMBL:KKT19762.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
30S ribosomal protein S13
seg (db=Seg db_id=seg from=32 to=48)
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gwf2_scaffold_503_65
uncultured bacterium, Bacteria
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Not on your lists |
55572..55946
----------------- DNA (375bp) protein (125aa) |
30S ribosomal protein S11 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=RS11_THERP
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpsK; 30S ribosomal protein S11
RIBOSOMAL_S11 (db=PatternScan db_id=PS00054 from=92 to=114 evalue=0.0 interpro_id=IPR018102 interpro_description=Ribosomal S11, conserved site)
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gwf2_scaffold_503_66
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
55971..56597
----------------- DNA (627bp) protein (209aa) |
30S ribosomal protein S4 n=6 Tax=Clostridium thermocellum RepID=RS4_CLOTH
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=PER_GWF2_43_17
30S ribosomal protein S4P
seg (db=Seg db_id=seg from=160 to=174)
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gwf2_scaffold_503_67
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
56644..57621
----------------- DNA (978bp) protein (326aa) |
DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT02481.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KKT02481.1};; TaxID=1619068 species="Bacteria; Peregrin
DNA-directed RNA polymerase subunit alpha n=4 Tax=Thermoanaerobacterium RepID=D9TSD2_THETC
DNA-directed RNA polymerase, alpha subunit
no description (db=HMMSmart db_id=SM00662 from=22 to=229 evalue=1.1e-74 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
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gwf2_scaffold_503_68
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
57658..58011
----------------- DNA (354bp) protein (118aa) |
50S ribosomal protein L17 n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=RL17_NITSB
50S ribosomal protein L17, large subunit ribosomal protein L17 {ECO:0000313|EMBL:KKT02482.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_1
rplQ; 50S ribosomal protein L17
L17: ribosomal protein L17 (db=HMMTigr db_id=TIGR00059 from=6 to=117 evalue=1.6e-26 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_503_69
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
58013..58453
----------------- DNA (441bp) protein (147aa) |
50S ribosomal protein L13 n=2 Tax=Desulfovibrio RepID=E6VWX0_DESAO
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=PER_GWF2_43_17
50S ribosomal protein L13
Ribosomal protein, L13p/L13Aa/L16e/organellar L13 types (db=HMMPIR db_id=PIRSF002181 from=1 to=146 evalue=1.9e-40 interpro_id=IPR005822 interpro_description=Ribosomal protein L13 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_503_70
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
58467..58877
----------------- DNA (411bp) protein (137aa) |
30S ribosomal protein S9 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1F0_MAHA5
30S ribosomal protein S9, small subunit ribosomal protein S9 {ECO:0000313|EMBL:KKT02484.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.
SSU ribosomal protein S9P
RIBOSOMAL_S9 (db=PatternScan db_id=PS00360 from=75 to=93 evalue=0.0 interpro_id=IPR020574 interpro_description=Ribosomal protein S9, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_503_71
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
59081..59734
----------------- DNA (654bp) protein (218aa) |
trmD; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=PER_GWF2_43_17
trmD; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A9B9_CLOBO
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=216 evalue=1.8e-104 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
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gwf2_scaffold_503_72
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
59767..62394
----------------- DNA (2628bp) protein (876aa) |
cation-transporting ATPase A (EC:3.6.3.10); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=PER_GWF2_43_17
Cation-transporting ATPase A, P type (ATPase, E1-E2 type) n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0K5_HALOH
rbh
cation transport ATPase
seg (db=Seg db_id=seg from=19 to=33)
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gwf2_scaffold_503_73
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
62376..62606
----------------- DNA (231bp) protein (77aa) |
UPF0235 protein MC7420_7730 n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VJE8_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKT02487.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
hypothetical protein
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gwf2_scaffold_503_74
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
62599..63384
----------------- DNA (786bp) protein (262aa) |
ksgA; dimethyladenosine transferase (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BGQ4_DEHSV
dimethyladenosine transferase Tax=PER_GWF2_43_17
RRNA_A_DIMETH (db=PatternScan db_id=PS01131 from=34 to=61 evalue=0.0 interpro_id=IPR020596 interpro_description=Ribosomal RNA adenine methylase transferase, conserved site GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
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gwf2_scaffold_503_75
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
63404..64342
----------------- DNA (939bp) protein (313aa) |
Uncharacterized protein {ECO:0000313|EMBL:KKT02489.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=212 to=223)
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gwf2_scaffold_503_76
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(64316..65782)
----------------- DNA (1467bp) protein (489aa) |
Uncharacterized protein {ECO:0000313|EMBL:KKT02490.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=413 to=426)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=4 to=126 evalue=1.8e-05)
(db=HMMPfam db_id=PF02518 from=340 to=450 evalue=4.7e-07 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
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gwf2_scaffold_503_77
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(65879..66754)
----------------- DNA (876bp) protein (292aa) |
Orotidine 5'-phosphate decarboxylase, orotidine-5'-phosphate decarboxylase {ECO:0000313|EMBL:KKT02491.1}; EC=4.1.1.23 {ECO:0000313|EMBL:KKT02491.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria
Orotidine 5'-phosphate decarboxylase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K798_HALHC
rbh
orotidine 5''-phosphate decarboxylase, subfamily 2
OMPDECASE (db=PatternScan db_id=PS00156 from=92 to=105 evalue=0.0 interpro_id=IPR018089 interpro_description=Orotidine 5'-phosphate decarboxylase, active site GO=Molecular Function: orotidine-5'-phosphate decarboxylase activity (GO:0004590), Biological Process: 'de novo' pyrimidine base biosynthetic process (GO:0006207))
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gwf2_scaffold_503_78
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(66767..67420)
----------------- DNA (654bp) protein (218aa) |
Orotidine 5'-phosphate decarboxylase, orotidine-5'-phosphate decarboxylase {ECO:0000313|EMBL:KKT02492.1}; EC=2.4.2.10 {ECO:0000313|EMBL:KKT02492.1};; EC=4.1.1.23 {ECO:0000313|EMBL:KKT02492.1};; TaxID=
orotidine 5'-phosphate decarboxylase (EC:2.4.2.10 4.1.1.23)
Orotate phosphoribosyltransferase n=6 Tax=Fusobacterium RepID=E5BGS5_9FUSO
PRTase-like (db=superfamily db_id=SSF53271 from=2 to=210 evalue=1.3e-44)
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gwf2_scaffold_503_79
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria
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Not on your lists |
comp(67424..68251)
----------------- DNA (828bp) protein (276aa) |
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=4 Tax=Methanocaldococcus RepID=PYRK_METJA
Putative dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000313|EMBL:KKT19747.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2
dihydroorotate dehydrogenase electron transfer subunit
(db=HMMPfam db_id=PF00175 from=103 to=205 evalue=2.3e-11 interpro_id=IPR001433 interpro_description=Oxidoreductase FAD/NAD(P)-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
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gwf2_scaffold_503_80
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(68253..69194)
----------------- DNA (942bp) protein (314aa) |
dihydroorotate dehydrogenase family protein (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=PER_GWF2_43_17
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQB6_9BACT
DHODEHASE_2 (db=PatternScan db_id=PS00912 from=247 to=267 evalue=0.0 interpro_id=IPR001295 interpro_description=Dihydroorotate dehydrogenase, conserved site GO=Molecular Function: dihydroorotate dehydrogenase activity (GO:0004152), Biological Process: 'de novo' pyrimidine base biosynthetic process (GO:0006207), Biological Process: oxidation-reduction process (GO:0055114))
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gwf2_scaffold_503_81
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(69310..70626)
----------------- DNA (1317bp) protein (439aa) |
dihydroorotase (EC:3.5.2.3)
Dihydroorotase, multifunctional complex type n=4 Tax=root RepID=B5EQR8_ACIF5
rbh
seg (db=Seg db_id=seg from=221 to=237)
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gwf2_scaffold_503_82
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(71188..76758)
----------------- DNA (5571bp) protein (1857aa) |
Putative uncharacterized protein n=1 Tax=Salpingoeca sp. (strain ATCC 50818) RepID=F2UAA2_SALS5
S-layer-like domain-containing protein Tax=PER_GWF2_43_17
S-layer protein
seg (db=Seg db_id=seg from=343 to=353)
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gwf2_scaffold_503_83
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(76842..77765)
----------------- DNA (924bp) protein (308aa) |
Aspartate carbamoyltransferase, aspartate carbamoyltransferase catalytic subunit {ECO:0000313|EMBL:KKT02497.1}; EC=2.1.3.2 {ECO:0000313|EMBL:KKT02497.1};; TaxID=1619068 species="Bacteria; Peregrinibac
Aspartate carbamoyltransferase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LI09_THEBM
aspartate carbamoyltransferase
CARBAMOYLTRANSFERASE (db=PatternScan db_id=PS00097 from=51 to=58 evalue=0.0 interpro_id=IPR006130 interpro_description=Aspartate/ornithine carbamoyltransferase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: amino acid binding (GO:0016597), Molecular Function: carboxyl- or carbamoyltransferase activity (GO:0016743))
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gwf2_scaffold_503_84
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
77839..78894
----------------- DNA (1056bp) protein (352aa) |
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=PER_GWF2_43_17
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN91_IGNAJ
rbh
ANTSNTHASEII (db=FPrintScan db_id=PR00097 from=213 to=222 evalue=1.0e-06)
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gwf2_scaffold_503_85
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
78897..80210
----------------- DNA (1314bp) protein (438aa) |
Uncharacterized protein n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4WZW7_9BACL
S-layer protein Tax=PER_GWF2_43_17
amidotransferase
seg (db=Seg db_id=seg from=13 to=29)
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gwf2_scaffold_503_86
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
80210..82210
----------------- DNA (2001bp) protein (667aa) |
Uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2F3_PELTS
Uncharacterized protein {ECO:0000313|EMBL:KKT02500.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
hypothetical protein
seg (db=Seg db_id=seg from=201 to=213)
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gwf2_scaffold_503_87
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
82229..83878
----------------- DNA (1650bp) protein (550aa) |
Putative uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU9_9BACT
hypothetical protein Tax=PER_GWF2_43_17
hypothetical protein
seg (db=Seg db_id=seg from=5 to=10)
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gwf2_scaffold_503_88
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(83928..85916)
----------------- DNA (1989bp) protein (663aa) |
UvrABC system protein B n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QGR1_9BACI
rbh
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=PER_GWF2_43_17
uvrB; excinuclease ABC subunit B
seg (db=Seg db_id=seg from=24 to=34)
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gwf2_scaffold_503_89
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
85984..86961
----------------- DNA (978bp) protein (326aa) |
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=15 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
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gwf2_scaffold_503_90
PER_GWF2_43_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(87247..87876)
----------------- DNA (630bp) protein (210aa) |
Ribulose-phosphate 3-epimerase, ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KKT02504.1}; EC=5.1.3.1 {ECO:0000313|EMBL:KKT02504.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="P
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B798_9BACI
RIBUL_P_3_EPIMER_1 (db=PatternScan db_id=PS01085 from=31 to=45 evalue=0.0 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
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