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L1_007_000M1_scaffold_10

Search features with annotation key words

Displaying items 31-60 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_10_31
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37121..37579
DNA (459bp) protein (153aa)
Predicted membrane protein n=2 Tax=root RepID=D4L5R0_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL14955.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_10_32
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(38030..38431)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=2 Tax=Ruminococcus RepID=D4L5R1_9FIRM
SSU ribosomal protein S9P
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_10_33
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(38451..38879)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=2 Tax=Ruminococcus RepID=D4L5R2_9FIRM
LSU ribosomal protein L13P
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_10_34
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39055..39609
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DZK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84354.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_10_35
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39904..40428)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84352.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_10_36
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40410..40571)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E880_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84351.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_10_37
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41254..42204)
DNA (951bp) protein (317aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CBL14960.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CBL14960.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Transcriptional regulator/sugar kinase n=2 Tax=root RepID=D4L5R5_9FIRM
L1_007_000M1_scaffold_10_38
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42260..43738)
DNA (1479bp) protein (493aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Inosine-5'-monophosphate dehydrogenase n=3 Tax=root RepID=D4L5R6_9FIRM
L1_007_000M1_scaffold_10_39
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43974..44789
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E875_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84346.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_10_40
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44905..45303)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84345.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_10_41
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45307..45660)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84344.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_10_42
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45805..47085)
DNA (1281bp) protein (427aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVZ1_9FIRM
Seryl-tRNA synthetase {ECO:0000313|EMBL:CCX84343.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_10_43
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47110..47958)
DNA (849bp) protein (283aa)
ParB-like protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6D7_9FIRM
ParB-like protein {ECO:0000313|EMBL:CCX84342.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
spo0J; Stage 0 sporulation protein J
L1_007_000M1_scaffold_10_44
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47960..48727)
DNA (768bp) protein (256aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E871_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CCX84341.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
soj; Sporulation initiation inhibitor protein soj
L1_007_000M1_scaffold_10_45
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49014..49871)
DNA (858bp) protein (286aa)
ParB-like protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVR3_9FIRM
ParB-like protein {ECO:0000313|EMBL:CCX84340.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
noc; Nucleoid occlusion protein
L1_007_000M1_scaffold_10_46
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49996..50709)
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZI9_9FIRM
L1_007_000M1_scaffold_10_47
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50709..52583)
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=root RepID=R5DVY6_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
glucose-inhibited division protein A
L1_007_000M1_scaffold_10_48
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52592..53959)
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
tRNA modification GTPase MnmE n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5S2_9FIRM
tRNA modification GTPase TrmE
L1_007_000M1_scaffold_10_49
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54002..54811)
DNA (810bp) protein (270aa)
R3H domain protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E866_9FIRM
R3H domain protein {ECO:0000313|EMBL:CCX84336.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
single-stranded nucleic acid binding R3H domain-containing protein
L1_007_000M1_scaffold_10_50
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54816..55823)
DNA (1008bp) protein (336aa)
Membrane protein insertase, YidC/Oxa1 family, C-terminal domain n=2 Tax=root RepID=D4L5S3_9FIRM
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
Membrane protein insertase, YidC/Oxa1 family, C-terminal domain {ECO:0000313|EMBL:CBL14968.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_10_51

Not on your lists

comp(56077..56418)
DNA (342bp) protein (114aa)
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Riibonuclease P {ECO:0000313|EMBL:EKC58703.1}; EC=3.1.26.5 {ECO:0000313|EMBL:EKC58703.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Ribonuclease P protein component n=2 Tax=root RepID=D4L5S5_9FIRM
L1_007_000M1_scaffold_10_52
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(56485..56619)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Ruminococcus RepID=D4L5S6_9FIRM
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_10_53
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56987..58384
DNA (1398bp) protein (466aa)
Chromosomal replication initiator protein DnaA n=3 Tax=root RepID=D4L5S7_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
chromosomal replication initiator protein DnaA
L1_007_000M1_scaffold_10_54
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58614..59720
DNA (1107bp) protein (369aa)
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA polymerase III subunit beta n=2 Tax=Ruminococcus RepID=D4L5S8_9FIRM
L1_007_000M1_scaffold_10_55
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59710..59922
DNA (213bp) protein (71aa)
Uncharacterized conserved protein n=2 Tax=Ruminococcus RepID=D4L5S9_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL14974.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_10_56
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59943..61040
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVX6_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
DNA replication and repair protein RecF
L1_007_000M1_scaffold_10_57
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61040..61312
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5E6B9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCX84327.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_10_58
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61339..62070
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E857_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCX84326.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_10_59
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62483..64558
DNA (2076bp) protein (692aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVQ0_9FIRM
L1_007_000M1_scaffold_10_60
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64600..65031
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZH4_9FIRM
conserved hypothetical protein TIGR00051
Uncharacterized protein {ECO:0000313|EMBL:CCX84324.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Displaying items 31-60 of 237 in total

View Taxonomy