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L1_007_000M1_scaffold_59

Search features with annotation key words

Displaying items 31-60 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_59_31
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35743..38103)
DNA (2361bp) protein (787aa)
Beta-1 4-xylanase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFA9_9FIRM
Beta-1 4-xylanase {ECO:0000313|EMBL:CCZ79417.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_32
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38150..38998)
DNA (849bp) protein (283aa)
Glycerophosphodiester phosphodiesterase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7I1_9FIRM
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CCZ79416.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycerophosphoryl diester phosphodiesterase
L1_007_000M1_scaffold_59_33
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39577..40407)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79415.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted xylanase/chitin deacetylase
L1_007_000M1_scaffold_59_34
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40468..41166)
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUM4_9FIRM
L1_007_000M1_scaffold_59_35
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41192..41653)
DNA (462bp) protein (154aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA2_9FIRM
S-ribosylhomocysteinase
L1_007_000M1_scaffold_59_36
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41677..42609)
DNA (933bp) protein (311aa)
Carbamate kinase n=2 Tax=environmental samples RepID=R5VFA3_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbamate kinase
L1_007_000M1_scaffold_59_37
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42637..43029)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25996.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
GtrA family protein
L1_007_000M1_scaffold_59_38
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43173..44693)
DNA (1521bp) protein (507aa)
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain n=2 Tax=environmental samples RepID=R5UMT4_9FIRM
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain {ECO:0000313|EMBL:CCZ79410.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L1_007_000M1_scaffold_59_39
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44787..45995)
DNA (1209bp) protein (403aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.23)
UDP-glucose pyrophosphorylase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCZ9_9FIRM
UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:CDA24795.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_007_000M1_scaffold_59_40
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45958..46137)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YTL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24796.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_007_000M1_scaffold_59_41
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46088..47254)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79408.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_42
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47259..47417)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79407.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_43
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47473..49197)
DNA (1725bp) protein (575aa)
alpha-phosphoglucomutase (EC:5.4.2.8 5.4.2.2)
Alpha-phosphoglucomutase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7G9_9FIRM
Alpha-phosphoglucomutase {ECO:0000313|EMBL:CCZ79406.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_59_44
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49354..49959)
DNA (606bp) protein (202aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMS8_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CCZ79405.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_007_000M1_scaffold_59_45
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50451..51350)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79403.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_59_46
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51377..52702)
DNA (1326bp) protein (442aa)
Ig domain protein group 2 domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF91_9FIRM
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CCZ79402.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ig domain-containing protein
L1_007_000M1_scaffold_59_47
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52728..54251)
DNA (1524bp) protein (508aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7G4_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CCZ79401.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cell envelope-related function transcriptional attenuator common domain
L1_007_000M1_scaffold_59_48
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54265..56064)
DNA (1800bp) protein (600aa)
Metallo-beta-lactamase domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YTQ9_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDA24841.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_007_000M1_scaffold_59_49
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(56428..57798)
DNA (1371bp) protein (457aa)
Polysaccharide pyruvyl transferase n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YPH7_9BACI
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ERI43269.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
hypothetical protein
L1_007_000M1_scaffold_59_50
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57812..58483)
DNA (672bp) protein (224aa)
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8M8_9FIRM
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:CDC67142.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_59_51
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58502..60304)
DNA (1803bp) protein (601aa)
Putative polyribitolphosphotransferase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CKD3_9FIRM
Putative polyribitolphosphotransferase {ECO:0000313|EMBL:CDA71981.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
Putative polyribitolphosphotransferase
L1_007_000M1_scaffold_59_52
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60333..61391)
DNA (1059bp) protein (353aa)
Sorbitol dehydrogenase (L-iditol 2-dehydrogenase)(Glucitol dehydrogenase) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBT9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05693.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_59_53
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61409..62119)
DNA (711bp) protein (237aa)
ispD2; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|SAAS:SAAS00030493, ECO:0000313|EMBL:CCO05694.1}; EC=2.7.7.60 {ECO:0000256|SAAS:SAAS00030493, ECO:0000313|EMBL:CCO05694.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4M7_9FIRM
L1_007_000M1_scaffold_59_54
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62133..62876)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78819.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L1_007_000M1_scaffold_59_55
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62912..63688)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y2_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L1_007_000M1_scaffold_59_56
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63722..64615)
DNA (894bp) protein (298aa)
Putative lipopolysaccharide cholinephosphotransferase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z5S2_9FIRM
Putative lipopolysaccharide cholinephosphotransferase {ECO:0000313|EMBL:CDA24162.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_007_000M1_scaffold_59_57
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64625..65680)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y9M7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24163.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
family 2 glycosyl transferase
L1_007_000M1_scaffold_59_58
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65700..67052)
DNA (1353bp) protein (451aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMR3_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CCZ79390.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L1_007_000M1_scaffold_59_59
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67102..67365)
DNA (264bp) protein (88aa)
Phosphocarrier HPr family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUK1_9FIRM
Phosphocarrier HPr family protein {ECO:0000313|EMBL:CCZ79389.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphotransferase System HPr (HPr) Family
L1_007_000M1_scaffold_59_60
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67378..68727)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBS9_9FIRM
Displaying items 31-60 of 150 in total

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