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L1_007_000M1_scaffold_59

Search features with annotation key words

Displaying items 91-120 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_59_91
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(101379..102239)
DNA (861bp) protein (287aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF42_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_92
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(102241..103122)
DNA (882bp) protein (294aa)
UPF0042 nucleotide-binding protein BN518_00645 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7B9_9FIRM
Nucleotide-binding protein BN518_00645 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted P-loop-containing kinase
L1_007_000M1_scaffold_59_93
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(103123..104028)
DNA (906bp) protein (302aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMM8_9FIRM
UDP-N-acetylenolpyruvoylglucosamine reductase
L1_007_000M1_scaffold_59_94
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(104028..105431)
DNA (1404bp) protein (468aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUG7_9FIRM
L1_007_000M1_scaffold_59_95
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105462..106403)
DNA (942bp) protein (314aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HPr kinase/phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM31_9FIRM
HPr kinase/phosphorylase
L1_007_000M1_scaffold_59_96
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106500..108368)
DNA (1869bp) protein (623aa)
UvrABC system protein C n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF37_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
excinuclease ABC, C subunit
L1_007_000M1_scaffold_59_97
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(108372..110498)
DNA (2127bp) protein (709aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7B3_9FIRM
ATP-dependent metalloprotease FtsH
L1_007_000M1_scaffold_59_98
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110690..112294
DNA (1605bp) protein (535aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMM5_9FIRM
L1_007_000M1_scaffold_59_99
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

112354..113349
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79349.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_100
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

113374..113550
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79348.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_101
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

113596..113769
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79347.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_102
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113802..114713)
DNA (912bp) protein (304aa)
CAAX protease self-immunity n=1 Tax=Roseburia sp. CAG:197 RepID=R5YRP8_9FIRM
CAAX protease self-immunity {ECO:0000313|EMBL:CDA24126.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
CAAX amino terminal protease family protein
L1_007_000M1_scaffold_59_103
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114845..115807)
DNA (963bp) protein (321aa)
Putative cytidylate kinase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDX9_9FIRM
Putative cytidylate kinase {ECO:0000313|EMBL:CDA25728.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_007_000M1_scaffold_59_104
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115821..117170)
DNA (1350bp) protein (450aa)
Transporter UIT6 family (TC 9.B.53) n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2G9_9FIRM
Transporter UIT6 family (TC 9.B.53) {ECO:0000313|EMBL:CCZ77576.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transporter, UIT6 family (TC 9.B.53)
L1_007_000M1_scaffold_59_105
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117556..118338)
DNA (783bp) protein (261aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glutamate racemase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHU7_9FIRM
glutamate racemase
L1_007_000M1_scaffold_59_106
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

118423..118845
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77574.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_107
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118896..119396)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77573.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_108
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

119553..121586
DNA (2034bp) protein (678aa)
Glycogen debranching enzyme archaeal type putative n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA67_9FIRM
Glycogen debranching enzyme archaeal type putative {ECO:0000313|EMBL:CCZ77572.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycogen debranching enzyme, archaeal type, putative
L1_007_000M1_scaffold_59_109
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(121684..121911)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5V6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76692.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L1_007_000M1_scaffold_59_110
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(121954..122442)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77571.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_111
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122464..122718)
DNA (255bp) protein (85aa)
Phosphotransferase System HPr (HPr) Family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHU4_9FIRM
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CCZ77570.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phosphotransferase system, HPr-related protein
L1_007_000M1_scaffold_59_112
unknown

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comp(122715..122822)
DNA (108bp) protein (36aa)

This feature has no annotations

L1_007_000M1_scaffold_59_113
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122865..125396)
DNA (2532bp) protein (844aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77569.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_114
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125435..125914)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77568.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_000M1_scaffold_59_115
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125965..128202)
DNA (2238bp) protein (746aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Alpha-glucosidases family 31 of glycosyl hydrolases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA63_9FIRM
Alpha-glucosidases family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CCZ77567.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_000M1_scaffold_59_116
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128239..128673)
DNA (435bp) protein (145aa)
Bacterial SH3 domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2G0_9FIRM
Bacterial SH3 domain {ECO:0000313|EMBL:CCZ77566.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Bacterial SH3 domain.
L1_007_000M1_scaffold_59_117
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128670..129560)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77565.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF3737).
L1_007_000M1_scaffold_59_118
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(129642..130337)
DNA (696bp) protein (232aa)
Polysaccharide deacetylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP87_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCZ77564.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted xylanase/chitin deacetylase
L1_007_000M1_scaffold_59_119
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130391..130615)
DNA (225bp) protein (75aa)
YolD-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UH45_9FIRM
YolD-like protein {ECO:0000313|EMBL:CCZ77563.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
YolD-like protein.
L1_007_000M1_scaffold_59_120
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130612..132066)
DNA (1455bp) protein (485aa)
ImpB/MucB/SamB family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VA60_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:CCZ77562.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
Displaying items 91-120 of 150 in total

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