ggKbase home page

L1_007_000M1_scaffold_107

Search features with annotation key words

Displaying items 31-60 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_107_31
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30783..32132
DNA (1350bp) protein (450aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y6K2_9PORP
dihydrolipoamide dehydrogenase
L1_007_000M1_scaffold_107_32
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32135..32875
DNA (741bp) protein (247aa)
Lipoyltransferase and lipoate-protein ligase n=2 Tax=Parabacteroides RepID=A7AEN4_9PORP
Lipoyltransferase and lipoate-protein ligase {ECO:0000313|EMBL:EDN86510.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lipoate-protein ligase A
L1_007_000M1_scaffold_107_33
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32892..34253
DNA (1362bp) protein (454aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes (EC:2.3.1.61)
2-oxo acid dehydrogenase acyltransferase (Catalytic domain) n=2 Tax=Parabacteroides RepID=A7AEN5_9PORP
2-oxo acid dehydrogenase acyltransferase (Catalytic domain) {ECO:0000313|EMBL:EDN86511.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_107_34
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34796..36832
DNA (2037bp) protein (679aa)
Transketolase, C-terminal domain protein n=2 Tax=Parabacteroides RepID=A7AEN7_9PORP
Transketolase C-terminal domain protein {ECO:0000313|EMBL:CDD12480.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
2-oxoisovalerate dehydrogenase
L1_007_000M1_scaffold_107_35
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36994..37500
DNA (507bp) protein (169aa)
Flavodoxin n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y1Z6_9PORP
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
flavodoxin FldA
L1_007_000M1_scaffold_107_36
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37671..38936)
DNA (1266bp) protein (422aa)
Outer membrane efflux protein n=2 Tax=Parabacteroides merdae RepID=A7AEN9_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN86515.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane efflux protein
L1_007_000M1_scaffold_107_37
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38969..42010)
DNA (3042bp) protein (1014aa)
RND transporter, HAE1/HME family, permease protein n=2 Tax=Parabacteroides merdae RepID=A7AEP0_9PORP
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EDN86516.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
AcrB/AcrD/AcrF family transporter
L1_007_000M1_scaffold_107_38
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42022..43071)
DNA (1050bp) protein (350aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Parabacteroides RepID=K6C4D1_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD14076.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
periplasmic linker protein multidrug resistance protein
L1_007_000M1_scaffold_107_39
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43220..44134)
DNA (915bp) protein (305aa)
DNA/RNA non-specific endonuclease n=2 Tax=Parabacteroides merdae RepID=A7AEP2_9PORP
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:EDN86518.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
endonuclease
L1_007_000M1_scaffold_107_40
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44385..45038)
DNA (654bp) protein (218aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AEP3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86519.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hemolysin III
L1_007_000M1_scaffold_107_41
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45043..45249)
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AEP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14074.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation transport ATPase
L1_007_000M1_scaffold_107_42
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45329..47539)
DNA (2211bp) protein (737aa)
Copper-exporting ATPase n=3 Tax=Parabacteroides RepID=A7AEP5_9PORP
Copper-exporting ATPase {ECO:0000313|EMBL:EDN86521.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
cation-transporting ATPase
L1_007_000M1_scaffold_107_43
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47727..48179
DNA (453bp) protein (151aa)
YhcH/YjgK/YiaL family protein n=4 Tax=Parabacteroides RepID=A7AEP6_9PORP
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:EDN86522.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_107_44
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48210..48395)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AEP7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86523.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_107_45
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48585..48809
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BH36_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13031.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_107_46
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48713..49828)
DNA (1116bp) protein (372aa)
Universal stress family protein n=3 Tax=Parabacteroides RepID=A7AEP8_9PORP
Universal stress family protein {ECO:0000313|EMBL:EDN86524.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
universal stress protein UspA
L1_007_000M1_scaffold_107_47
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49942..50259)
DNA (318bp) protein (106aa)
Uncharacterized protein n=6 Tax=Parabacteroides RepID=A7AEP9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13035.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_48
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50333..51025)
DNA (693bp) protein (231aa)
PAP2 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X1P9_9PORP
PAP2 family protein {ECO:0000313|EMBL:CDD13044.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
membrane-associated phospholipid phosphatase
L1_007_000M1_scaffold_107_49
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51101..51868)
DNA (768bp) protein (256aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUT1_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD13045.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_50
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51873..53687)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y3U9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13047.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_51
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53737..54489)
DNA (753bp) protein (251aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WP88_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD13048.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_52
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54505..55524)
DNA (1020bp) protein (340aa)
von Willebrand factor type A domain protein n=3 Tax=Parabacteroides RepID=A7AEQ4_9PORP
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDN86530.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_107_53
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55538..56524)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X9S4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13051.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_54
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56526..57542)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WP91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13053.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_55
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57552..58421)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUT8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13055.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_56
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58527..59522)
DNA (996bp) protein (332aa)
ATPase family associated with various cellular activities (AAA) n=4 Tax=Parabacteroides RepID=A7AEQ8_9PORP
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDN86534.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
magnesium chelatase subunit I
L1_007_000M1_scaffold_107_57
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59681..60835)
DNA (1155bp) protein (385aa)
DNA-binding protein HU n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X1R0_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:CDD13059.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
integration host factor IHF subunit alpha
L1_007_000M1_scaffold_107_58
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60828..61118)
DNA (291bp) protein (97aa)
DNA-binding protein HU n=6 Tax=Parabacteroides RepID=A7AER0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07678.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
DNA-binding protein HU
L1_007_000M1_scaffold_107_59
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61202..62497)
DNA (1296bp) protein (432aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WP97_9PORP
Fe-S oxidoreductase
L1_007_000M1_scaffold_107_60
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62518..63471)
DNA (954bp) protein (318aa)
Signal recognition particle receptor FtsY n=3 Tax=Parabacteroides RepID=A7AER2_9PORP
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
recognition particle-docking protein FtsY
Displaying items 31-60 of 190 in total

View Taxonomy