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L1_007_000M1_scaffold_107

Search features with annotation key words

Displaying items 151-180 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_107_151
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168097..168561
DNA (465bp) protein (155aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=3 Tax=Parabacteroides RepID=A7AFD3_9PORP
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L1_007_000M1_scaffold_107_152
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168769..169203
DNA (435bp) protein (145aa)
Flavin reductase-like protein n=4 Tax=Parabacteroides RepID=A7AFD4_9PORP
Flavin reductase-like protein {ECO:0000313|EMBL:EDN86760.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
flavoredoxin
L1_007_000M1_scaffold_107_153
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

169206..169931
DNA (726bp) protein (242aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFD5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15001.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_154
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

169971..170315
DNA (345bp) protein (115aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFD6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86762.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_107_155
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

170460..170999
DNA (540bp) protein (180aa)
Flavin reductase n=3 Tax=Parabacteroides RepID=A7AFD7_9PORP
Flavin reductase {ECO:0000313|EMBL:EDN86763.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
iron-sulfur flavoprotein
L1_007_000M1_scaffold_107_156
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

171123..171404
DNA (282bp) protein (94aa)
Transglycosylase associated protein n=2 Tax=Parabacteroides RepID=R6Y9C5_9PORP
Transglycosylase associated protein {ECO:0000313|EMBL:CDD14997.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_157
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(171494..172072)
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFE0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14996.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_158
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(172113..173480)
DNA (1368bp) protein (456aa)
Iron-sulfur cluster-binding protein n=3 Tax=Parabacteroides RepID=K6C4K9_9PORP
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDN86767.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transport protein
L1_007_000M1_scaffold_107_159
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(173477..174217)
DNA (741bp) protein (247aa)
Cysteine-rich domain protein n=3 Tax=Parabacteroides RepID=A7AFE2_9PORP
Cysteine-rich domain protein {ECO:0000313|EMBL:EDN86768.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
oxidoreductase glycolate oxidase
L1_007_000M1_scaffold_107_160
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(174290..177562)
DNA (3273bp) protein (1091aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Carbamoyl-phosphate synthase, large subunit n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFE3_9PORP
carbamyl phosphate synthetase
L1_007_000M1_scaffold_107_161
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(177612..178742)
DNA (1131bp) protein (377aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7K3_9PORP
L1_007_000M1_scaffold_107_162
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(178780..180672)
DNA (1893bp) protein (631aa)
Class II glutamine amidotransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUS0_9PORP
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDD15053.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
amidophosphoribosyltransferase
L1_007_000M1_scaffold_107_163
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(180943..181461)
DNA (519bp) protein (173aa)
Acetyltransferase, GNAT family n=3 Tax=Parabacteroides RepID=A7AFE7_9PORP
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDD15052.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acetyltransferase
L1_007_000M1_scaffold_107_164
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(181476..185939)
DNA (4464bp) protein (1488aa)
ATP-dependent DNA helicase RecQ family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XFG5_9PORP
ATP-dependent DNA helicase RecQ family {ECO:0000313|EMBL:CDD15051.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RecQ familyATP-dependent DNA helicase
L1_007_000M1_scaffold_107_165
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(185944..186333)
DNA (390bp) protein (130aa)
ATP-dependent DNA helicase, RecQ family n=3 Tax=Parabacteroides RepID=A7AFE8_9PORP
ATP-dependent DNA helicase RecQ family {ECO:0000313|EMBL:CDD15050.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_166
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

186600..188144
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7K0_9PORP
two-component system sensor histidine kinase
L1_007_000M1_scaffold_107_167
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188490..193013
DNA (4524bp) protein (1508aa)
Class II glutamine amidotransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUR7_9PORP
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDD15048.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glutamate synthase, large subunit
L1_007_000M1_scaffold_107_168
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

193178..194611
DNA (1434bp) protein (478aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Parabacteroides merdae RepID=A7AFF2_9PORP
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:EKN14493.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glutamate synthase, small subunit
L1_007_000M1_scaffold_107_169
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

194638..196302
DNA (1665bp) protein (555aa)
Asparagine synthetase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A892_9PORP
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EKN14494.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
asnB; asparagine synthetase B
L1_007_000M1_scaffold_107_170
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(196406..198361)
DNA (1956bp) protein (652aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X275_9PORP
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:CDD13244.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_107_171
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(198490..199269)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13243.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_107_172
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(199563..199901)
DNA (339bp) protein (113aa)
Cupin domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4C0_9PORP
Cupin domain protein {ECO:0000313|EMBL:CDD13242.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cupin
L1_007_000M1_scaffold_107_173
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

199973..203557
DNA (3585bp) protein (1195aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Beta galactosidase small chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XA71_9PORP
beta-galactosidase
L1_007_000M1_scaffold_107_174
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

203740..205380
DNA (1641bp) protein (547aa)
Bacterial alpha-L-rhamnosidase n=3 Tax=Parabacteroides RepID=A7AFG1_9PORP
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:EDN86787.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L1_007_000M1_scaffold_107_175
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

205823..206647
DNA (825bp) protein (275aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Diaminopimelate epimerase n=3 Tax=Parabacteroides merdae RepID=A7AFG2_9PORP
dapF; diaminopimelate epimerase
L1_007_000M1_scaffold_107_176
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

206674..207903
DNA (1230bp) protein (410aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
LL-diaminopimelate aminotransferase n=3 Tax=Parabacteroides merdae RepID=A7AFG3_9PORP
L,L-diaminopimelate aminotransferase
L1_007_000M1_scaffold_107_177
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

207971..210157
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14502.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glutamine synthetase
L1_007_000M1_scaffold_107_178
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

210290..210553
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14230.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_107_179
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

210676..212607
DNA (1932bp) protein (644aa)
nadE; NAD synthetase (EC:6.3.1.5)
NAD+ synthetase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A881_9PORP
NAD+ synthetase {ECO:0000313|EMBL:EKN14504.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L1_007_000M1_scaffold_107_180
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(213282..214691)
DNA (1410bp) protein (470aa)
Tat pathway signal sequence domain protein n=4 Tax=Parabacteroides RepID=A7AFH0_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD13846.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Gfo/Idh/MocA family oxidoreductase
Displaying items 151-180 of 190 in total

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