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L1_007_000M1_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_139_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..4653)
DNA (4653bp) protein (1551aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HYP3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY96475.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
helicase domain-containing protein
L1_007_000M1_scaffold_139_2
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4643..5257)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GUN2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY16457.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
hypothetical protein
L1_007_000M1_scaffold_139_3
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5258..7345)
DNA (2088bp) protein (696aa)
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase III bacteria and conjugative plasmid n=1 Tax=Prevotella sp. CAG:755 RepID=R5GV04_9BACT
DNA topoisomerase III bacteria and conjugative plasmid {ECO:0000313|EMBL:CCY16456.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
L1_007_000M1_scaffold_139_4
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7305..7421)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GGB7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY16455.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
L1_007_000M1_scaffold_139_5
Prevotella salivae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7418..9052)
DNA (1635bp) protein (545aa)
PF13351 family protein n=1 Tax=Prevotella salivae F0493 RepID=U2KU05_9BACT
PF13351 family protein {ECO:0000313|EMBL:ERK01957.1}; TaxID=1395125 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella salivae F0493.;"
hypothetical protein
L1_007_000M1_scaffold_139_6
Prevotella salivae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9086..9442)
DNA (357bp) protein (119aa)
DNA-binding helix-turn-helix protein n=1 Tax=Prevotella salivae F0493 RepID=U2LCQ7_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK02071.1}; TaxID=1395125 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella salivae F0493.;"
hypothetical protein
L1_007_000M1_scaffold_139_7
Prevotella salivae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9456..9797)
DNA (342bp) protein (114aa)
DNA-binding helix-turn-helix protein n=1 Tax=Prevotella salivae F0493 RepID=U2LBY8_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK01831.1}; TaxID=1395125 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella salivae F0493.;"
hypothetical protein
L1_007_000M1_scaffold_139_8
Prevotella salivae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9927..10295
DNA (369bp) protein (123aa)
DNA-binding helix-turn-helix protein n=1 Tax=Prevotella salivae F0493 RepID=U2MJZ6_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK01990.1}; TaxID=1395125 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella salivae F0493.;"
hypothetical protein
L1_007_000M1_scaffold_139_9
Prevotella salivae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10292..10588
DNA (297bp) protein (99aa)
DNA-binding helix-turn-helix protein n=1 Tax=Prevotella salivae F0493 RepID=U2LCN0_9BACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK02036.1}; TaxID=1395125 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella salivae F0493.;"
hypothetical protein
L1_007_000M1_scaffold_139_10
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10676..11050)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GL47_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY16449.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
hypothetical protein
L1_007_000M1_scaffold_139_11
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11062..12297)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GGW5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY16448.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
putative bacteriophage integrase
L1_007_000M1_scaffold_139_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12720..15581
DNA (2862bp) protein (954aa)
Peptidase M16 inactive domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y5F0_9PORP
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDD13637.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
M16 family peptidase
L1_007_000M1_scaffold_139_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15582..16037
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AEA9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86385.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_007_000M1_scaffold_139_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16054..18600
DNA (2547bp) protein (849aa)
Peptidase family M1 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3D7_9PORP
Peptidase family M1 {ECO:0000313|EMBL:CDD13639.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aminopeptidase
L1_007_000M1_scaffold_139_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18884..19735
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWE6_9PORP
L1_007_000M1_scaffold_139_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19785..21074
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Histidinol dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBC1_9PORP
hisD; histidinol dehydrogenase
L1_007_000M1_scaffold_139_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21071..22102
DNA (1032bp) protein (344aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Histidinol-phosphate aminotransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y5F5_9PORP
histidinol-phosphate aminotransferase
L1_007_000M1_scaffold_139_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22114..23241
DNA (1128bp) protein (376aa)
imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQQ8_9PORP
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_139_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23317..24429)
DNA (1113bp) protein (371aa)
Glycosyl hydrolase family 43 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X718_9PORP
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDD12051.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase family protein
L1_007_000M1_scaffold_139_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24533..24934
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYU6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12049.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_139_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25091..25930)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSS8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12435.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hemagglutinin-like protein
L1_007_000M1_scaffold_139_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26594..27673
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZV9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12434.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L1_007_000M1_scaffold_139_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27763..28248)
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMN0_9PORP
transcriptional regulator
L1_007_000M1_scaffold_139_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28254..30395)
DNA (2142bp) protein (714aa)
Tex-like protein N-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y1S6_9PORP
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDD12432.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA-binding protein
L1_007_000M1_scaffold_139_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30546..30827
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7W8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12431.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system sensor histidine kinase
L1_007_000M1_scaffold_139_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30690..32072)
DNA (1383bp) protein (461aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSS5_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD12430.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter
L1_007_000M1_scaffold_139_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32080..32994)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZV2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12429.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L1_007_000M1_scaffold_139_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33107..35761)
DNA (2655bp) protein (885aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AK71_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16128.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
negative regulator of genetic competence
L1_007_000M1_scaffold_139_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


36065..38674
DNA (2610bp) protein (870aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
DNA gyrase subunit A n=2 Tax=Parabacteroides RepID=K5YQ43_9PORP
DNA gyrase subunit A
L1_007_000M1_scaffold_139_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38716..39942
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZXE0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16126.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
Displaying items 1-30 of 81 in total

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