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L1_007_000M1_scaffold_156

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_156_1
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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735..1499
DNA (765bp) protein (255aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QCA4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ19871.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Predicted transcriptional regulators
L1_007_000M1_scaffold_156_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1567..2022)
DNA (456bp) protein (152aa)
Stage V sporulation protein AC n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DNA4_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CCX81683.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
stage V sporulation protein AC
L1_007_000M1_scaffold_156_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2172..3299
DNA (1128bp) protein (376aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYK8_9FIRM
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CCX81682.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3339..4520
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Probable tRNA sulfurtransferase n=3 Tax=root RepID=D4L690_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L1_007_000M1_scaffold_156_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4546..6495
DNA (1950bp) protein (650aa)
Sortase, SrtB family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L691_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:CBL15136.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
sortase, SrtB family
L1_007_000M1_scaffold_156_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6507..6920
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L692_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15137.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7287..8480
DNA (1194bp) protein (398aa)
cystathionine gamma-synthase (EC:2.5.1.48 4.4.1.1)
Cystathionine gamma-synthase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DN48_9FIRM
Cystathionine gamma-synthase {ECO:0000313|EMBL:CCX81675.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8493..8714
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81674.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_156_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9383..10372
DNA (990bp) protein (330aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5G4_9FIRM
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CCX83391.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Membrane proteins related to metalloendopeptidases
L1_007_000M1_scaffold_156_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10699..12093
DNA (1395bp) protein (465aa)
peptidoglycan O-acetyltransferase (EC:2.3.1.-)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWV1_9FIRM
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:CCX83389.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12133..13290
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L697_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15142.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13526..14035)
DNA (510bp) protein (170aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
ATP:corrinoid adenosyltransferase n=4 Tax=root RepID=D4L698_9FIRM
ATP:corrinoid adenosyltransferase {ECO:0000313|EMBL:CCX83387.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14546..14857
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=2 Tax=Ruminococcus RepID=D4L699_9FIRM
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14931..15563
DNA (633bp) protein (211aa)
50S ribosomal protein L3 n=2 Tax=Ruminococcus RepID=D4L6A0_9FIRM
LSU ribosomal protein L3P
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_15
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15580..16203
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=2 Tax=Ruminococcus RepID=D4L6A1_9FIRM
LSU ribosomal protein L4P
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16200..16493
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=2 Tax=Ruminococcus RepID=D4L6A2_9FIRM
LSU ribosomal protein L23P
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16596..17429
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=2 Tax=Ruminococcus RepID=D4L6A3_9FIRM
LSU ribosomal protein L2P
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17449..17721
DNA (273bp) protein (91aa)
30S ribosomal protein S19 n=2 Tax=Ruminococcus RepID=D4L6A4_9FIRM
SSU ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17742..18083
DNA (342bp) protein (114aa)
50S ribosomal protein L22 n=2 Tax=Ruminococcus RepID=D4L6A5_9FIRM
LSU ribosomal protein L22P
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18098..18769
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWT9_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
SSU ribosomal protein S3P
L1_007_000M1_scaffold_156_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18769..19188
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=3 Tax=Clostridiales RepID=D4L6A7_9FIRM
LSU ribosomal protein L16P
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19188..19391
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=2 Tax=Ruminococcus RepID=D4L6A8_9FIRM
LSU ribosomal protein L29P
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_156_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19409..19666
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5E5_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
30S ribosomal protein S17
L1_007_000M1_scaffold_156_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19706..20074
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DT04_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
LSU ribosomal protein L14P
L1_007_000M1_scaffold_156_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20089..20406
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=2 Tax=Ruminococcus RepID=D4L6A9_9FIRM
LSU ribosomal protein L24P
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20421..20960
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Ruminococcus RepID=D4L6B0_9FIRM
Ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20973..21158
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3L9_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Ribosomal protein S14
L1_007_000M1_scaffold_156_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21178..21576
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Ruminococcus RepID=D4L6B1_9FIRM
SSU ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21592..22134
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=2 Tax=Ruminococcus RepID=D4L6B2_9FIRM
LSU ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_156_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22153..22512
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Ruminococcus RepID=D4L6B3_9FIRM
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Displaying items 1-30 of 133 in total

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